Coexpression cluster: Cluster_77 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006520 cellular amino acid metabolic process 5.97% (4/67) 3.42 0.000534 0.027441
GO:0006082 organic acid metabolic process 5.97% (4/67) 2.54 0.00502 0.031468
GO:0051234 establishment of localization 10.45% (7/67) 1.72 0.005289 0.031614
GO:0006810 transport 10.45% (7/67) 1.72 0.005289 0.031614
GO:0008104 protein localization 4.48% (3/67) 3.17 0.004571 0.031749
GO:0033036 macromolecule localization 4.48% (3/67) 3.17 0.004571 0.031749
GO:0043436 oxoacid metabolic process 5.97% (4/67) 2.54 0.004943 0.031762
GO:0019752 carboxylic acid metabolic process 5.97% (4/67) 2.56 0.004793 0.032413
GO:0034660 ncRNA metabolic process 4.48% (3/67) 3.13 0.004924 0.032445
GO:0097159 organic cyclic compound binding 25.37% (17/67) 1.02 0.003031 0.032457
GO:1901363 heterocyclic compound binding 25.37% (17/67) 1.02 0.003031 0.032457
GO:0003723 RNA binding 5.97% (4/67) 2.58 0.0045 0.033043
GO:0051179 localization 10.45% (7/67) 1.7 0.00566 0.033058
GO:0043039 tRNA aminoacylation 4.48% (3/67) 4.26 0.000517 0.033193
GO:0043038 amino acid activation 4.48% (3/67) 4.26 0.000517 0.033193
GO:0004812 aminoacyl-tRNA ligase activity 4.48% (3/67) 4.26 0.000517 0.033193
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.48% (3/67) 4.26 0.000517 0.033193
GO:0042886 amide transport 4.48% (3/67) 3.18 0.004457 0.033688
GO:0015031 protein transport 4.48% (3/67) 3.18 0.004457 0.033688
GO:0045184 establishment of protein localization 4.48% (3/67) 3.18 0.004457 0.033688
GO:0015833 peptide transport 4.48% (3/67) 3.18 0.004457 0.033688
GO:0051641 cellular localization 4.48% (3/67) 3.18 0.004457 0.033688
GO:0017016 Ras GTPase binding 2.99% (2/67) 5.13 0.001473 0.034419
GO:0031267 small GTPase binding 2.99% (2/67) 5.13 0.001473 0.034419
GO:0004826 phenylalanine-tRNA ligase activity 1.49% (1/67) 8.38 0.003007 0.035121
GO:0016782 transferase activity, transferring sulfur-containing groups 1.49% (1/67) 8.38 0.003007 0.035121
GO:0004366 glycerol-3-phosphate O-acyltransferase activity 1.49% (1/67) 8.38 0.003007 0.035121
GO:0008146 sulfotransferase activity 1.49% (1/67) 8.38 0.003007 0.035121
GO:0043486 histone exchange 1.49% (1/67) 8.38 0.003007 0.035121
GO:0006432 phenylalanyl-tRNA aminoacylation 1.49% (1/67) 8.38 0.003007 0.035121
GO:0046907 intracellular transport 4.48% (3/67) 3.3 0.003508 0.036063
GO:0051649 establishment of localization in cell 4.48% (3/67) 3.28 0.003707 0.036642
GO:0044281 small molecule metabolic process 7.46% (5/67) 2.25 0.004046 0.037134
GO:0016874 ligase activity 4.48% (3/67) 3.23 0.004018 0.038246
GO:0008536 Ran GTPase binding 2.99% (2/67) 5.47 0.000912 0.039049
GO:0019899 enzyme binding 2.99% (2/67) 4.33 0.004427 0.039234
GO:0036094 small molecule binding 16.42% (11/67) 1.21 0.00723 0.041294
GO:0005488 binding 37.31% (25/67) 0.84 0.001469 0.041945
GO:0071705 nitrogen compound transport 4.48% (3/67) 2.91 0.007537 0.042112
GO:0071702 organic substance transport 4.48% (3/67) 2.89 0.007852 0.042935
GO:0003676 nucleic acid binding 13.43% (9/67) 1.63 0.002377 0.043634
GO:0051020 GTPase binding 2.99% (2/67) 4.68 0.002762 0.044368
GO:0050661 NADP binding 2.99% (2/67) 4.68 0.002762 0.044368
GO:0003674 molecular_function 55.22% (37/67) 0.6 0.001385 0.044487
GO:0006399 tRNA metabolic process 4.48% (3/67) 3.52 0.002299 0.045448
GO:0006886 intracellular protein transport 4.48% (3/67) 3.52 0.002299 0.045448
GO:0140101 catalytic activity, acting on a tRNA 4.48% (3/67) 3.81 0.001283 0.047097
GO:0043044 ATP-dependent chromatin remodeling 1.49% (1/67) 6.79 0.008993 0.047167
GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity 1.49% (1/67) 6.79 0.008993 0.047167
GO:0006418 tRNA aminoacylation for protein translation 2.99% (2/67) 3.76 0.009561 0.049141
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_84 0.03 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_190 0.025 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_57 0.026 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_171 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_173 0.024 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_41 0.021 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_46 0.028 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_140 0.022 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_206 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_119 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_181 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_45 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_190 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_315 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_358 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_441 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_462 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_495 0.026 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_90 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_187 0.024 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_211 0.027 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0074 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0016 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0050 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_118 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_238 0.024 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_129 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_146 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_247 0.028 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_141 0.023 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_23 0.026 Orthogroups_2024-Update Compare
Sequences (67) (download table)

InterPro Domains

GO Terms

Family Terms