Coexpression cluster: Cluster_46 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043038 amino acid activation 7.32% (6/82) 3.97 2e-06 0.000119
GO:0043039 tRNA aminoacylation 7.32% (6/82) 3.97 2e-06 0.000119
GO:0004812 aminoacyl-tRNA ligase activity 7.32% (6/82) 3.97 2e-06 0.000119
GO:0016875 ligase activity, forming carbon-oxygen bonds 7.32% (6/82) 3.97 2e-06 0.000119
GO:0016874 ligase activity 8.54% (7/82) 3.33 5e-06 0.000276
GO:0140101 catalytic activity, acting on a tRNA 7.32% (6/82) 3.53 1.2e-05 0.0005
GO:0006418 tRNA aminoacylation for protein translation 6.1% (5/82) 3.86 2.1e-05 0.000753
GO:0006399 tRNA metabolic process 7.32% (6/82) 3.23 3.9e-05 0.001228
GO:0140098 catalytic activity, acting on RNA 8.54% (7/82) 2.71 9e-05 0.002544
GO:0006520 cellular amino acid metabolic process 7.32% (6/82) 2.85 0.000175 0.003708
GO:0034660 ncRNA metabolic process 7.32% (6/82) 2.85 0.000175 0.003708
GO:0044281 small molecule metabolic process 10.98% (9/82) 2.17 0.000162 0.004116
GO:0015979 photosynthesis 3.66% (3/82) 3.93 0.000921 0.017993
GO:0019752 carboxylic acid metabolic process 7.32% (6/82) 2.36 0.001067 0.019359
GO:0006082 organic acid metabolic process 7.32% (6/82) 2.31 0.001267 0.020109
GO:0043436 oxoacid metabolic process 7.32% (6/82) 2.31 0.001267 0.020109
GO:0006139 nucleobase-containing compound metabolic process 13.41% (11/82) 1.47 0.001862 0.027816
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_201 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_57 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_92 0.022 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_12 0.034 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_43 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_133 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_37 0.02 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_77 0.028 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_175 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.024 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_23 0.027 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_86 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_33 0.027 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_148 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_34 0.022 Orthogroups_2024-Update Compare
Sequences (82) (download table)

InterPro Domains

GO Terms

Family Terms