Coexpression cluster: Cluster_224 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0140101 catalytic activity, acting on a tRNA 5.88% (3/51) 4.54 0.000301 0.006658
GO:0004812 aminoacyl-tRNA ligase activity 5.88% (3/51) 4.76 0.000191 0.006758
GO:0016875 ligase activity, forming carbon-oxygen bonds 5.88% (3/51) 4.76 0.000191 0.006758
GO:0043039 tRNA aminoacylation 5.88% (3/51) 4.76 0.000191 0.006758
GO:0043038 amino acid activation 5.88% (3/51) 4.76 0.000191 0.006758
GO:0090304 nucleic acid metabolic process 11.76% (6/51) 2.71 0.000296 0.00749
GO:0016070 RNA metabolic process 9.8% (5/51) 3.11 0.000284 0.008363
GO:0004721 phosphoprotein phosphatase activity 3.92% (2/51) 5.93 0.000492 0.008702
GO:0006399 tRNA metabolic process 5.88% (3/51) 4.33 0.000458 0.009005
GO:0034660 ncRNA metabolic process 5.88% (3/51) 4.0 0.000891 0.014334
GO:0006139 nucleobase-containing compound metabolic process 11.76% (6/51) 2.32 0.00121 0.017845
GO:0002161 aminoacyl-tRNA editing activity 1.96% (1/51) 9.46 0.001421 0.019353
GO:0046483 heterocycle metabolic process 11.76% (6/51) 2.22 0.001735 0.021932
GO:0006725 cellular aromatic compound metabolic process 11.76% (6/51) 2.2 0.001874 0.022116
GO:0016874 ligase activity 5.88% (3/51) 3.54 0.002235 0.023275
GO:1901360 organic cyclic compound metabolic process 11.76% (6/51) 2.15 0.002213 0.024484
GO:0006418 tRNA aminoacylation for protein translation 5.88% (3/51) 4.89 0.000144 0.025565
GO:0140098 catalytic activity, acting on RNA 7.84% (4/51) 2.78 0.002749 0.02703
GO:0006520 cellular amino acid metabolic process 5.88% (3/51) 3.39 0.003001 0.027957
GO:0016791 phosphatase activity 3.92% (2/51) 4.5 0.003547 0.031392
GO:0006397 mRNA processing 3.92% (2/51) 4.46 0.003775 0.031815
GO:0016071 mRNA metabolic process 3.92% (2/51) 4.33 0.004497 0.036182
GO:0016788 hydrolase activity, acting on ester bonds 9.8% (5/51) 2.19 0.00475 0.036554
GO:0061505 DNA topoisomerase II activity 1.96% (1/51) 7.14 0.007087 0.043257
GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity 1.96% (1/51) 7.14 0.007087 0.043257
GO:0008094 DNA-dependent ATPase activity 1.96% (1/51) 7.14 0.007087 0.043257
GO:0017119 Golgi transport complex 1.96% (1/51) 7.14 0.007087 0.043257
GO:0016787 hydrolase activity 21.57% (11/51) 1.23 0.005981 0.044111
GO:0042578 phosphoric ester hydrolase activity 3.92% (2/51) 4.07 0.00641 0.045383
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum pennellii HCCA clusters Cluster_162 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_400 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_14 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_72 0.021 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_104 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_205 0.022 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_34 0.02 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_117 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_459 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_509 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_5 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_201 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_203 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_211 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_236 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_132 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_104 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_261 0.021 Orthogroups_2024-Update Compare
Sequences (51) (download table)

InterPro Domains

GO Terms

Family Terms