Coexpression cluster: Cluster_510 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006520 cellular amino acid metabolic process 9.43% (5/53) 4.36 5e-06 0.000243
GO:1901360 organic cyclic compound metabolic process 16.98% (9/53) 2.83 4e-06 0.000267
GO:0034641 cellular nitrogen compound metabolic process 18.87% (10/53) 2.54 7e-06 0.000291
GO:0006725 cellular aromatic compound metabolic process 16.98% (9/53) 2.87 3e-06 0.000298
GO:0034660 ncRNA metabolic process 9.43% (5/53) 4.7 1e-06 0.000385
GO:0046483 heterocycle metabolic process 16.98% (9/53) 2.88 3e-06 0.000419
GO:0003723 RNA binding 11.32% (6/53) 3.56 1.2e-05 0.000446
GO:0090304 nucleic acid metabolic process 13.21% (7/53) 3.06 2e-05 0.000646
GO:0016070 RNA metabolic process 11.32% (6/53) 3.3 3.2e-05 0.000761
GO:0003729 mRNA binding 3.77% (2/53) 7.96 2.7e-05 0.000788
GO:0006807 nitrogen compound metabolic process 30.19% (16/53) 1.62 3.2e-05 0.000827
GO:0000049 tRNA binding 3.77% (2/53) 7.38 6.5e-05 0.00139
GO:0043038 amino acid activation 5.66% (3/53) 5.1 9.5e-05 0.001532
GO:0043039 tRNA aminoacylation 5.66% (3/53) 5.1 9.5e-05 0.001532
GO:0006082 organic acid metabolic process 9.43% (5/53) 3.38 0.000119 0.001532
GO:0019752 carboxylic acid metabolic process 9.43% (5/53) 3.4 0.000111 0.001589
GO:0043436 oxoacid metabolic process 9.43% (5/53) 3.39 0.000118 0.001597
GO:0006139 nucleobase-containing compound metabolic process 13.21% (7/53) 2.68 0.000107 0.001617
GO:0016875 ligase activity, forming carbon-oxygen bonds 5.66% (3/53) 5.12 9.2e-05 0.001691
GO:0004812 aminoacyl-tRNA ligase activity 5.66% (3/53) 5.12 9.2e-05 0.001691
GO:0071704 organic substance metabolic process 32.08% (17/53) 1.35 0.000172 0.002117
GO:0044237 cellular metabolic process 28.3% (15/53) 1.44 0.000237 0.002778
GO:0009987 cellular process 32.08% (17/53) 1.3 0.000256 0.002874
GO:0004190 aspartic-type endopeptidase activity 3.77% (2/53) 6.21 0.000341 0.003254
GO:0070001 aspartic-type peptidase activity 3.77% (2/53) 6.21 0.000341 0.003254
GO:0003674 molecular_function 64.15% (34/53) 0.68 0.000316 0.003266
GO:0140101 catalytic activity, acting on a tRNA 5.66% (3/53) 4.54 0.000304 0.003268
GO:0044238 primary metabolic process 30.19% (16/53) 1.32 0.000374 0.003446
GO:0006399 tRNA metabolic process 5.66% (3/53) 4.32 0.000472 0.004204
GO:0006364 rRNA processing 3.77% (2/53) 5.6 0.000788 0.006164
GO:0016072 rRNA metabolic process 3.77% (2/53) 5.6 0.000788 0.006164
GO:0043170 macromolecule metabolic process 24.53% (13/53) 1.43 0.000725 0.006239
GO:0016874 ligase activity 5.66% (3/53) 4.04 0.000828 0.006284
GO:0044281 small molecule metabolic process 9.43% (5/53) 2.79 0.000782 0.00651
GO:1901564 organonitrogen compound metabolic process 22.64% (12/53) 1.44 0.001154 0.008507
GO:0006396 RNA processing 5.66% (3/53) 3.66 0.001745 0.012504
GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity 1.89% (1/53) 8.38 0.003004 0.017616
GO:0006788 heme oxidation 1.89% (1/53) 8.38 0.003004 0.017616
GO:0019213 deacetylase activity 1.89% (1/53) 8.38 0.003004 0.017616
GO:0004392 heme oxygenase (decyclizing) activity 1.89% (1/53) 8.38 0.003004 0.017616
GO:0032991 protein-containing complex 11.32% (6/53) 2.1 0.00266 0.01806
GO:0003676 nucleic acid binding 16.98% (9/53) 1.58 0.002736 0.0181
GO:0005488 binding 41.51% (22/53) 0.82 0.002657 0.018527
GO:0140098 catalytic activity, acting on RNA 5.66% (3/53) 3.4 0.002917 0.018813
GO:0070011 peptidase activity, acting on L-amino acid peptides 7.55% (4/53) 2.71 0.003304 0.018945
GO:0097159 organic cyclic compound binding 28.3% (15/53) 1.04 0.004131 0.019031
GO:1901363 heterocyclic compound binding 28.3% (15/53) 1.04 0.004131 0.019031
GO:0005685 U1 snRNP 1.89% (1/53) 7.96 0.004004 0.019129
GO:0006376 mRNA splice site selection 1.89% (1/53) 7.96 0.004004 0.019129
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase 1.89% (1/53) 7.96 0.004004 0.019129
GO:0005849 mRNA cleavage factor complex 1.89% (1/53) 7.96 0.004004 0.019129
GO:0006378 mRNA polyadenylation 1.89% (1/53) 7.96 0.004004 0.019129
GO:0004175 endopeptidase activity 5.66% (3/53) 3.31 0.0035 0.01963
GO:0016787 hydrolase activity 16.98% (9/53) 1.52 0.003709 0.019935
GO:0008152 metabolic process 32.08% (17/53) 0.94 0.004426 0.020031
GO:1901607 alpha-amino acid biosynthetic process 3.77% (2/53) 4.49 0.003651 0.020043
GO:0008233 peptidase activity 7.55% (4/53) 2.64 0.003874 0.0204
GO:0034470 ncRNA processing 3.77% (2/53) 4.25 0.005039 0.022415
GO:1901269 lipooligosaccharide metabolic process 1.89% (1/53) 7.38 0.006 0.022764
GO:0009085 lysine biosynthetic process 1.89% (1/53) 7.38 0.006 0.022764
GO:0009245 lipid A biosynthetic process 1.89% (1/53) 7.38 0.006 0.022764
GO:0006553 lysine metabolic process 1.89% (1/53) 7.38 0.006 0.022764
GO:0046451 diaminopimelate metabolic process 1.89% (1/53) 7.38 0.006 0.022764
GO:0009089 lysine biosynthetic process via diaminopimelate 1.89% (1/53) 7.38 0.006 0.022764
GO:1901271 lipooligosaccharide biosynthetic process 1.89% (1/53) 7.38 0.006 0.022764
GO:0046493 lipid A metabolic process 1.89% (1/53) 7.38 0.006 0.022764
GO:0008652 cellular amino acid biosynthetic process 3.77% (2/53) 4.21 0.005322 0.022886
GO:1901605 alpha-amino acid metabolic process 3.77% (2/53) 4.21 0.005322 0.022886
GO:0120114 Sm-like protein family complex 1.89% (1/53) 6.96 0.007992 0.028637
GO:0097525 spliceosomal snRNP complex 1.89% (1/53) 6.96 0.007992 0.028637
GO:0030532 small nuclear ribonucleoprotein complex 1.89% (1/53) 6.96 0.007992 0.028637
GO:0008097 5S rRNA binding 1.89% (1/53) 6.96 0.007992 0.028637
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 1.89% (1/53) 6.79 0.008986 0.03176
GO:0016272 prefoldin complex 1.89% (1/53) 6.64 0.00998 0.033879
GO:0004576 oligosaccharyl transferase activity 1.89% (1/53) 6.64 0.00998 0.033879
GO:1901566 organonitrogen compound biosynthetic process 7.55% (4/53) 2.25 0.009888 0.034475
GO:0043631 RNA polyadenylation 1.89% (1/53) 6.5 0.010973 0.035834
GO:0042168 heme metabolic process 1.89% (1/53) 6.5 0.010973 0.035834
GO:0035639 purine ribonucleoside triphosphate binding 15.09% (8/53) 1.38 0.010777 0.036111
GO:0044428 nuclear part 3.77% (2/53) 3.6 0.012018 0.037814
GO:0043648 dicarboxylic acid metabolic process 1.89% (1/53) 6.38 0.011964 0.038108
GO:0031124 mRNA 3'-end processing 1.89% (1/53) 6.38 0.011964 0.038108
GO:0006547 histidine metabolic process 1.89% (1/53) 6.26 0.012955 0.038865
GO:0000105 histidine biosynthetic process 1.89% (1/53) 6.26 0.012955 0.038865
GO:0052803 imidazole-containing compound metabolic process 1.89% (1/53) 6.26 0.012955 0.038865
GO:0031123 RNA 3'-end processing 1.89% (1/53) 6.26 0.012955 0.038865
GO:0071826 ribonucleoprotein complex subunit organization 1.89% (1/53) 6.15 0.013945 0.040883
GO:0022618 ribonucleoprotein complex assembly 1.89% (1/53) 6.15 0.013945 0.040883
GO:1990904 ribonucleoprotein complex 5.66% (3/53) 2.56 0.014405 0.041294
GO:0044249 cellular biosynthetic process 9.43% (5/53) 1.8 0.014268 0.041362
GO:0008565 protein transporter activity 1.89% (1/53) 6.06 0.014933 0.042338
GO:1901576 organic substance biosynthetic process 9.43% (5/53) 1.73 0.017147 0.048086
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 1.89% (1/53) 5.79 0.017893 0.04964
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_116 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_219 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_249 0.023 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_279 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_58 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_86 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_110 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_122 0.034 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_144 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_276 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_387 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_400 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_40 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_125 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_164 0.029 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_181 0.039 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_238 0.021 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_14 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_269 0.021 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_75 0.022 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_116 0.024 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_154 0.022 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_243 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_283 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_130 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_182 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_247 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_101 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_412 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_423 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_424 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_475 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_495 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_517 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_29 0.025 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_79 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_113 0.028 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_156 0.02 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_22 0.032 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_83 0.02 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0068 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0080 0.029 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_75 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_134 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_148 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_181 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_184 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_227 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_254 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_264 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_268 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_276 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_288 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_355 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_362 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_376 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_384 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_61 0.03 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_168 0.024 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_280 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_87 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_135 0.027 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_162 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_174 0.023 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_89 0.035 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_170 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_261 0.041 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_26 0.044 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_123 0.038 Orthogroups_2024-Update Compare
Sequences (53) (download table)

InterPro Domains

GO Terms

Family Terms