Coexpression cluster: Cluster_137 (HCAA Clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0090304 nucleic acid metabolic process 11.76% (8/68) 2.58 5.5e-05 0.003119
GO:0006725 cellular aromatic compound metabolic process 13.24% (9/68) 2.29 8.7e-05 0.003298
GO:1901360 organic cyclic compound metabolic process 13.24% (9/68) 2.25 0.000108 0.0035
GO:0016070 RNA metabolic process 10.29% (7/68) 2.87 4.8e-05 0.003626
GO:0046483 heterocycle metabolic process 13.24% (9/68) 2.29 8.5e-05 0.003844
GO:0034660 ncRNA metabolic process 7.35% (5/68) 3.94 1.9e-05 0.004213
GO:0006139 nucleobase-containing compound metabolic process 13.24% (9/68) 2.45 3.7e-05 0.004228
GO:0004812 aminoacyl-tRNA ligase activity 4.41% (3/68) 4.53 0.000293 0.005115
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.41% (3/68) 4.53 0.000293 0.005115
GO:0043039 tRNA aminoacylation 4.41% (3/68) 4.53 0.000293 0.005115
GO:0043038 amino acid activation 4.41% (3/68) 4.53 0.000293 0.005115
GO:0006418 tRNA aminoacylation for protein translation 4.41% (3/68) 4.66 0.000227 0.005733
GO:0016874 ligase activity 5.88% (4/68) 3.78 0.000205 0.00582
GO:0034641 cellular nitrogen compound metabolic process 13.24% (9/68) 1.89 0.000661 0.010726
GO:0140098 catalytic activity, acting on RNA 5.88% (4/68) 3.19 0.000969 0.014664
GO:1901363 heterocyclic compound binding 23.53% (16/68) 1.2 0.001191 0.01502
GO:0097159 organic cyclic compound binding 23.53% (16/68) 1.2 0.001191 0.01502
GO:0140101 catalytic activity, acting on a tRNA 4.41% (3/68) 3.88 0.001104 0.01566
GO:0006399 tRNA metabolic process 4.41% (3/68) 3.68 0.001676 0.020019
GO:0070475 rRNA base methylation 1.47% (1/68) 8.16 0.003501 0.021481
GO:0031167 rRNA methylation 1.47% (1/68) 8.16 0.003501 0.021481
GO:0016435 rRNA (guanine) methyltransferase activity 1.47% (1/68) 8.16 0.003501 0.021481
GO:0070476 rRNA (guanine-N7)-methylation 1.47% (1/68) 8.16 0.003501 0.021481
GO:0000154 rRNA modification 1.47% (1/68) 8.16 0.003501 0.021481
GO:0090501 RNA phosphodiester bond hydrolysis 1.47% (1/68) 8.16 0.003501 0.021481
GO:0090305 nucleic acid phosphodiester bond hydrolysis 1.47% (1/68) 8.16 0.003501 0.021481
GO:0000469 cleavage involved in rRNA processing 1.47% (1/68) 8.16 0.003501 0.021481
GO:0006333 chromatin assembly or disassembly 1.47% (1/68) 8.16 0.003501 0.021481
GO:0106073 dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity 1.47% (1/68) 8.16 0.003501 0.021481
GO:0036265 RNA (guanine-N7)-methylation 1.47% (1/68) 8.16 0.003501 0.021481
GO:0080090 regulation of primary metabolic process 5.88% (4/68) 2.6 0.004275 0.023107
GO:0031323 regulation of cellular metabolic process 5.88% (4/68) 2.6 0.004275 0.023107
GO:0051171 regulation of nitrogen compound metabolic process 5.88% (4/68) 2.6 0.004275 0.023107
GO:0006807 nitrogen compound metabolic process 17.65% (12/68) 1.23 0.004395 0.023202
GO:0003676 nucleic acid binding 11.76% (8/68) 1.64 0.003973 0.023736
GO:0009987 cellular process 20.59% (14/68) 1.1 0.004659 0.024035
GO:0005488 binding 32.35% (22/68) 0.81 0.004143 0.024112
GO:0006520 cellular amino acid metabolic process 4.41% (3/68) 3.14 0.004786 0.024144
GO:0043170 macromolecule metabolic process 16.18% (11/68) 1.27 0.005374 0.025417
GO:0019222 regulation of metabolic process 5.88% (4/68) 2.51 0.005318 0.025684
GO:0060255 regulation of macromolecule metabolic process 5.88% (4/68) 2.52 0.005225 0.025785
GO:0008150 biological_process 33.82% (23/68) 0.72 0.007114 0.028838
GO:0006488 dolichol-linked oligosaccharide biosynthetic process 1.47% (1/68) 7.16 0.006991 0.028852
GO:0006490 oligosaccharide-lipid intermediate biosynthetic process 1.47% (1/68) 7.16 0.006991 0.028852
GO:0030008 TRAPP complex 1.47% (1/68) 7.16 0.006991 0.028852
GO:0005664 nuclear origin of replication recognition complex 1.47% (1/68) 7.16 0.006991 0.028852
GO:0008649 rRNA methyltransferase activity 1.47% (1/68) 7.16 0.006991 0.028852
GO:0140102 catalytic activity, acting on a rRNA 1.47% (1/68) 7.16 0.006991 0.028852
GO:0010556 regulation of macromolecule biosynthetic process 5.88% (4/68) 2.7 0.003381 0.029516
GO:0019219 regulation of nucleobase-containing compound metabolic process 5.88% (4/68) 2.7 0.003381 0.029516
GO:0009889 regulation of biosynthetic process 5.88% (4/68) 2.7 0.003381 0.029516
GO:2000112 regulation of cellular macromolecule biosynthetic process 5.88% (4/68) 2.7 0.003381 0.029516
GO:0031326 regulation of cellular biosynthetic process 5.88% (4/68) 2.7 0.003381 0.029516
GO:0009451 RNA modification 2.94% (2/68) 3.95 0.007434 0.029604
GO:0008144 drug binding 11.76% (8/68) 1.52 0.006527 0.030237
GO:0044237 cellular metabolic process 17.65% (12/68) 1.11 0.008448 0.033063
GO:0006364 rRNA processing 2.94% (2/68) 4.57 0.003172 0.03429
GO:0016072 rRNA metabolic process 2.94% (2/68) 4.57 0.003172 0.03429
GO:0044238 primary metabolic process 19.12% (13/68) 1.04 0.008917 0.034309
GO:0006275 regulation of DNA replication 1.47% (1/68) 6.57 0.010468 0.039603
GO:0071704 organic substance metabolic process 19.12% (13/68) 0.97 0.013287 0.048649
GO:0000808 origin recognition complex 1.47% (1/68) 6.16 0.013933 0.048659
GO:0051052 regulation of DNA metabolic process 1.47% (1/68) 6.16 0.013933 0.048659
GO:0044281 small molecule metabolic process 5.88% (4/68) 2.12 0.013603 0.049012
GO:0050794 regulation of cellular process 5.88% (4/68) 2.13 0.01326 0.049343
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_26 0.03 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_121 0.022 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_238 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_67 0.035 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_115 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_118 0.024 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_134 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_56 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_134 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_195 0.023 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_7 0.026 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_26 0.022 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_30 0.021 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_53 0.024 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_188 0.024 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_263 0.025 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_72 0.022 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_87 0.019 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_166 0.022 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_114 0.026 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_131 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_59 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_266 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_281 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_29 0.019 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_51 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_69 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_90 0.019 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_105 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_126 0.029 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_135 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_138 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_191 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_226 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_233 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_321 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_397 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_417 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_422 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_544 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_555 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_562 0.028 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_5 0.019 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_76 0.024 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_98 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_131 0.033 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_138 0.025 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0005 0.021 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0036 0.026 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0081 0.023 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0126 0.023 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0137 0.028 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_5 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_38 0.029 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_75 0.034 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_166 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_172 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_173 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_190 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_240 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_253 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_285 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_28 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_45 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_61 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_168 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_216 0.032 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_66 0.026 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_142 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_221 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_29 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_45 0.029 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_83 0.023 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_295 0.024 Orthogroups_2024-Update Compare
Sequences (68) (download table)

InterPro Domains

GO Terms

Family Terms