Coexpression cluster: Cluster_44 (HCAA Clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034472 snRNA 3'-end processing 2.67% (2/75) 8.02 1.5e-05 0.000471
GO:0016073 snRNA metabolic process 2.67% (2/75) 8.02 1.5e-05 0.000471
GO:0034477 U6 snRNA 3'-end processing 2.67% (2/75) 8.02 1.5e-05 0.000471
GO:0097526 spliceosomal tri-snRNP complex 2.67% (2/75) 8.02 1.5e-05 0.000471
GO:0046540 U4/U6 x U5 tri-snRNP complex 2.67% (2/75) 8.02 1.5e-05 0.000471
GO:0043628 ncRNA 3'-end processing 2.67% (2/75) 8.02 1.5e-05 0.000471
GO:0016180 snRNA processing 2.67% (2/75) 8.02 1.5e-05 0.000471
GO:0120114 Sm-like protein family complex 2.67% (2/75) 6.69 0.000146 0.003272
GO:0097525 spliceosomal snRNP complex 2.67% (2/75) 6.69 0.000146 0.003272
GO:0030532 small nuclear ribonucleoprotein complex 2.67% (2/75) 6.69 0.000146 0.003272
GO:0031123 RNA 3'-end processing 2.67% (2/75) 6.43 0.000219 0.00445
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 2.67% (2/75) 6.02 0.000406 0.006494
GO:0000375 RNA splicing, via transesterification reactions 2.67% (2/75) 6.02 0.000406 0.006494
GO:0000398 mRNA splicing, via spliceosome 2.67% (2/75) 6.02 0.000406 0.006494
GO:0016070 RNA metabolic process 8.0% (6/75) 2.5 0.000666 0.00994
GO:0008380 RNA splicing 2.67% (2/75) 5.32 0.001117 0.014713
GO:0004518 nuclease activity 4.0% (3/75) 3.9 0.001067 0.014939
GO:0006396 RNA processing 5.33% (4/75) 3.06 0.001356 0.016878
GO:0044446 intracellular organelle part 6.67% (5/75) 2.47 0.002078 0.02327
GO:0044422 organelle part 6.67% (5/75) 2.47 0.002078 0.02327
GO:1901663 quinone biosynthetic process 1.33% (1/75) 8.02 0.003862 0.030894
GO:0071569 protein ufmylation 1.33% (1/75) 8.02 0.003862 0.030894
GO:1901661 quinone metabolic process 1.33% (1/75) 8.02 0.003862 0.030894
GO:0042181 ketone biosynthetic process 1.33% (1/75) 8.02 0.003862 0.030894
GO:0006744 ubiquinone biosynthetic process 1.33% (1/75) 8.02 0.003862 0.030894
GO:0006743 ubiquinone metabolic process 1.33% (1/75) 8.02 0.003862 0.030894
GO:0044428 nuclear part 4.0% (3/75) 3.39 0.002946 0.03142
GO:0043170 macromolecule metabolic process 16.0% (12/75) 1.25 0.004086 0.031564
GO:0044424 intracellular part 10.67% (8/75) 1.6 0.004805 0.035876
GO:0090304 nucleic acid metabolic process 8.0% (6/75) 2.02 0.003581 0.036466
GO:0034641 cellular nitrogen compound metabolic process 10.67% (8/75) 1.58 0.005148 0.037198
GO:0006397 mRNA processing 2.67% (2/75) 4.02 0.006772 0.047401
GO:0070070 proton-transporting V-type ATPase complex assembly 1.33% (1/75) 7.02 0.007709 0.047966
GO:0007031 peroxisome organization 1.33% (1/75) 7.02 0.007709 0.047966
GO:0042180 cellular ketone metabolic process 1.33% (1/75) 7.02 0.007709 0.047966
GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly 1.33% (1/75) 7.02 0.007709 0.047966
GO:0044464 cell part 10.67% (8/75) 1.47 0.008167 0.049444
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_182 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_191 0.024 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_259 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_175 0.026 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_177 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_397 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_33 0.025 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_104 0.025 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_229 0.023 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_20 0.031 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_64 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_68 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_271 0.024 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_64 0.023 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_106 0.027 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_116 0.027 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_117 0.031 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_204 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_57 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_153 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_207 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_241 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_122 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_158 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_362 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_437 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_493 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_83 0.024 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_107 0.024 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_130 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0068 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_70 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_181 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_197 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_249 0.031 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_330 0.026 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_121 0.024 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_238 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_297 0.024 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_113 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_125 0.029 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_157 0.025 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_166 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_251 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_102 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_129 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_228 0.025 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_264 0.023 Orthogroups_2024-Update Compare
Sequences (75) (download table)

InterPro Domains

GO Terms

Family Terms