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Heatmap: Cluster_50 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
1.88 -0.64 0.08 -0.72 -0.41 0.45 1.03 -1.55 -0.82 -0.61 -2.32 -3.37
0.06 0.1 0.38 - -0.73 -0.34 1.9 0.43 -0.36 -1.19 -0.9 -1.47
0.83 -0.74 -1.06 -0.68 -0.97 -1.46 0.14 0.38 0.45 0.42 0.34 0.35
-1.55 -0.06 0.2 0.32 -0.27 0.48 1.23 0.6 -0.41 -1.52 -1.23 -0.52
0.38 0.32 -0.38 -0.55 -0.35 0.03 0.53 0.13 0.32 0.05 -0.39 -0.72
- - 2.6 -0.36 -1.01 -0.46 -0.98 -1.66 - - 0.81 0.47
- -0.24 1.26 - 0.91 0.46 - 0.46 0.86 - - 1.21
- -1.03 - -1.22 -0.29 0.26 2.3 1.5 - -0.16 - -1.26
- -1.67 -0.72 0.72 0.75 -1.81 -0.35 0.14 0.41 0.73 -0.58 0.95
-0.93 0.36 0.15 -0.86 -1.26 0.38 1.81 0.73 -0.07 -1.26 -3.08 -2.86
- 0.13 1.25 0.76 -0.34 0.79 1.52 0.36 -2.57 - - -
0.46 0.04 -0.4 -0.3 -0.47 0.08 0.04 0.39 -0.06 -0.11 0.0 0.03
0.42 0.58 -0.87 -0.08 0.01 0.4 -0.1 -1.04 -0.53 -0.91 0.07 0.72
1.75 1.32 - -0.42 - - 0.96 1.38 -0.25 - - -
1.67 -1.31 - 0.5 -0.45 0.98 0.87 1.03 - - - -1.26
0.62 0.41 -0.71 -1.05 0.14 -0.09 0.58 0.83 -0.23 -0.52 -0.88 -0.69
0.27 0.26 -0.26 -0.14 -0.27 0.24 0.56 0.46 -0.08 -0.26 -0.69 -0.78
0.42 -0.06 -0.24 -0.04 0.02 0.19 0.19 0.06 -0.2 -0.43 -0.37 0.21
- -2.79 0.19 0.46 1.38 -2.08 -0.19 -1.09 -0.19 0.47 0.53 0.53
0.44 -1.54 -0.03 0.16 0.6 -0.25 -0.13 0.21 -0.5 - 0.5 0.73
- -0.48 -0.48 -0.26 0.09 0.57 1.75 0.71 -0.37 -0.09 -1.89 -2.41
- 0.67 0.77 -2.57 -1.44 -1.45 1.03 0.85 0.57 -0.17 -1.75 0.37
- - 2.59 - -0.68 -0.12 1.86 -0.32 - - - -
- 1.37 2.87 - - - - 1.06 - - - -
0.65 0.25 0.49 -0.26 -0.57 0.49 1.25 -0.03 -2.31 -2.14 -1.96 -0.17
- -1.07 - -1.77 -0.43 1.4 2.62 0.76 - - - -
1.61 -0.78 -1.15 -0.58 -1.09 -1.98 0.45 0.44 -0.09 0.62 -0.42 -0.81
0.92 -0.11 1.7 0.99 0.88 0.54 - -2.36 - -1.18 - -
- 1.43 2.42 1.72 - - - -0.58 - - - -
- -1.38 - - - 1.33 2.35 1.39 - 0.49 - -
- -0.7 - - - 0.38 2.41 1.33 -0.61 -0.5 -1.82 -0.73
1.38 0.07 -1.46 -2.79 - -1.31 0.96 1.38 -0.3 0.42 -0.62 -3.55
- 0.07 - - -1.3 -0.74 2.1 1.48 0.52 -0.58 - -0.4
0.12 -0.06 0.97 0.63 0.07 -0.32 -0.43 -0.63 -0.34 0.01 -0.42 -0.61
2.04 -0.61 -1.8 - 0.22 -1.23 0.57 0.3 0.04 -0.13 -0.52 -
1.04 0.61 -0.62 -0.45 -0.26 0.28 0.36 0.05 -0.93 -1.37 -1.3 0.44
0.76 0.31 1.78 0.03 0.65 0.23 -0.71 -2.52 - -1.08 -0.71 -
- - 2.36 - - 1.56 - - - - 1.96 -
1.04 0.32 -0.34 -0.61 -0.89 -0.37 0.69 0.45 -0.68 -0.4 -0.44 -0.26
-1.71 0.81 1.25 0.97 0.64 0.63 -1.28 -1.64 -3.72 -1.68 -1.32 -0.03
-1.48 1.33 0.02 -1.35 -2.16 -1.28 1.04 0.55 0.59 -0.3 -0.2 -1.43
-0.53 0.42 -1.39 -3.91 -3.49 -1.38 1.36 1.18 0.89 -0.44 -0.36 -0.24
0.7 -1.28 2.1 -1.47 0.91 -0.14 -0.35 -2.77 -0.18 -1.41 - -1.51
- - - - - 1.85 2.33 1.75 - - - -
-0.21 0.28 -0.15 -0.47 -0.11 0.66 0.62 0.3 0.01 -0.41 -0.59 -0.72
0.34 -0.07 0.63 -1.83 -0.33 -1.04 0.66 0.62 0.18 0.31 -0.43 -1.19
0.68 -0.04 -0.42 -0.43 -0.45 0.22 0.68 0.77 0.45 -0.31 -1.44 -2.34
-0.93 -0.13 0.84 -0.12 -0.09 1.13 1.49 0.06 -1.15 -2.25 -3.74 -2.95
0.01 0.2 -0.78 -0.22 -0.15 0.38 0.85 0.68 -0.59 -0.51 -0.43 -0.55
0.08 0.24 -0.58 -0.24 -0.34 0.29 0.21 0.32 -0.11 -0.26 -0.19 0.25
0.17 -0.1 0.09 -0.11 0.08 0.52 1.01 0.41 -0.24 -0.78 -1.31 -1.8
- - 3.18 - 1.54 - - - - - - -
1.57 -1.63 -0.88 -0.99 -1.63 -3.79 -0.07 0.58 0.56 0.58 -0.02 -0.17
- - 2.62 0.92 - - - - - 1.49 - 0.17
1.93 -1.05 - 1.2 - - -0.87 0.85 -0.08 1.09 - -
- - 2.39 - -0.96 - 0.49 -0.41 -0.01 - 0.86 0.34
- - 2.87 - 1.52 - - 0.87 - - - -
0.44 0.49 -0.4 -0.19 -0.37 0.01 0.33 0.65 0.0 -0.36 -0.77 -0.64
1.04 0.32 -0.85 -0.65 0.21 0.29 -0.16 -0.19 -0.92 -0.45 -0.74 0.58
0.57 0.38 -0.84 -0.68 -0.78 0.1 0.19 0.74 -0.18 -0.21 -0.16 -0.11
1.88 -1.1 1.41 - -0.24 - 0.5 -0.59 - - -0.27 0.53
-0.35 0.23 -1.86 -1.08 -0.43 -0.48 0.47 1.02 0.68 -0.17 -0.19 0.08
1.03 0.45 -1.18 -1.42 -1.38 -0.16 0.7 0.22 0.17 -0.44 -0.15 -0.07
0.74 0.78 -0.11 -0.08 -0.32 -0.2 0.04 0.19 -0.85 -0.82 -0.77 0.26
0.35 0.14 -0.17 -0.2 -0.28 -0.0 0.22 0.23 0.31 0.05 -0.37 -0.6
1.95 0.56 - - - -0.32 1.03 0.92 - -0.15 - 0.02
- -0.91 1.18 -0.15 1.37 - 0.14 -0.18 -1.88 -0.71 1.02 -0.31
- 0.52 1.51 0.6 - -0.29 - 0.56 0.98 - 0.11 -0.23
- 1.63 0.92 - - 0.08 -1.13 -2.55 - 1.36 0.45 0.49
1.5 0.22 -0.46 -0.7 -0.1 -0.54 0.4 0.69 -0.58 -1.24 -1.93 -0.4
- - 3.58 - - - - - - - - -
- 0.42 1.93 - - - - 1.51 1.39 - - 0.47
-0.05 0.45 -0.18 -0.26 -0.35 0.26 1.01 0.46 0.25 -0.47 -1.39 -1.8
1.07 0.61 1.07 -0.1 -0.75 - -0.72 -0.35 0.07 - -0.08 0.44
- 1.23 1.41 -0.29 -0.23 -0.39 - 0.06 - 0.28 0.88 -1.05
- -2.51 1.31 -0.27 -2.37 1.65 2.06 0.02 - - - -
1.07 - 2.18 - - - 1.08 0.67 0.19 - - -0.86
- - 1.88 - 0.53 0.08 - 1.08 0.48 - 1.21 -
- -1.67 - - -2.03 -0.89 2.08 1.32 1.15 0.28 -0.67 -3.13
0.97 0.32 -0.04 -0.78 -0.62 0.2 0.58 0.07 -0.48 -0.74 -0.78 0.0
0.42 0.47 -0.41 -0.79 -0.35 0.66 1.02 0.39 -0.26 -0.84 -1.43 -1.06
- - 3.18 - 0.83 - - 0.19 - - - -
-1.51 -2.35 0.49 -0.89 0.03 0.93 1.36 0.82 -0.28 -0.79 -1.73 -0.84
1.05 0.12 -0.46 0.24 0.29 0.2 -0.39 0.46 -0.96 -1.22 -0.92 -0.07
- - 2.6 - - - 0.28 0.79 - - 0.92 0.14
- - 2.45 - 1.1 - 2.13 - - - - -
1.41 0.98 2.76 -0.76 - - - - - - - -
- - 2.57 - 1.6 - 0.51 - - - 0.69 -
2.24 0.36 -0.34 - -0.33 -2.36 -0.56 0.35 0.01 -0.61 -1.09 -3.01
-0.03 0.33 -0.61 -0.29 -0.19 -0.19 0.16 0.32 0.14 -0.07 0.01 0.17
0.8 -0.03 -1.59 -1.03 -0.09 0.8 0.78 -0.86 -0.71 -1.12 -0.69 0.87
0.63 0.31 -0.63 -0.93 -0.87 -0.19 0.42 0.45 0.06 -0.04 0.01 -0.17
- - - - -0.92 0.5 2.4 1.34 - -0.92 0.18 -0.74
-0.39 -0.72 0.44 -0.94 -0.72 1.08 1.51 0.97 -1.0 -2.23 -2.4 -1.67
- - 2.13 - - - - 0.33 1.6 - 1.73 -
- - 0.37 -0.33 0.42 1.16 1.86 0.09 - -0.26 -0.31 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.