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Heatmap: Cluster_3 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
13 h after light
15 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
- 2.56 - 1.54 - - - 1.68 - - - -
- 1.41 - - 2.07 - 1.02 - 1.63 - - -
- 1.87 -0.71 0.83 -0.48 - 1.53 - -0.96 0.88 - -
- - 1.32 1.85 -0.04 1.43 - - 0.48 -0.28 - -
1.31 0.24 - 2.32 1.42 - -0.59 - - - - -
- - 0.85 2.0 2.17 -0.28 -0.91 -1.55 - - - -
- -0.67 0.97 -0.62 1.85 - 0.16 - -1.4 0.45 -0.5 0.65
- 1.11 -1.01 1.82 -1.24 1.17 0.46 -2.77 -1.3 -1.46 -1.46 -1.04
- -0.48 1.31 1.53 -0.64 0.93 0.2 -1.47 0.56 -3.11 -2.79 -2.9
- - 0.83 1.88 -1.39 0.83 -0.36 0.05 1.03 -0.93 - -
-0.6 -0.04 -0.18 0.08 -0.8 -1.31 -0.93 1.26 -0.16 0.65 0.91 -2.39
0.54 2.23 - -0.18 0.68 -0.75 - 1.13 - -0.73 - -
-1.91 -1.09 0.5 1.28 0.65 0.46 -0.49 0.9 -1.41 -0.37 -1.03 -1.92
-0.31 -1.08 0.13 - 0.68 -0.21 0.21 - 0.42 1.17 1.26 -
- 0.88 -0.17 1.36 1.35 0.37 - - 0.99 -0.19 - -
0.2 0.32 -0.03 -0.26 -0.22 -0.03 0.07 0.27 -0.23 -0.29 -0.18 0.2
-2.23 0.81 0.21 0.75 0.89 -3.13 -0.47 0.89 -0.67 0.67 -3.14 -1.66
1.44 0.62 0.5 1.46 -0.12 -0.23 -1.65 -0.9 -2.27 -2.7 -3.14 -1.05
-0.91 0.38 0.22 -1.0 0.32 -0.48 0.44 -1.0 0.06 0.28 0.9 -0.85
- - -1.21 1.87 -0.89 - 2.31 - -0.05 - 0.55 -
-0.76 0.83 0.71 0.48 -0.85 -2.04 -0.4 0.16 1.03 -0.61 0.3 -
- - - - 2.45 - - - - 1.22 1.19 0.93
- 2.71 -0.04 2.17 - - - - - - - -
-0.48 0.86 - - 0.76 -0.03 -1.25 1.65 -1.99 0.36 0.77 -
-0.28 0.01 -0.26 0.13 -0.01 -0.52 0.11 0.29 0.24 0.39 0.2 -0.73
0.57 1.46 -0.26 1.48 0.19 -0.72 -1.53 -2.85 -0.64 0.04 -3.0 -3.11
- 1.47 -0.68 -0.15 0.05 -0.33 1.03 - -0.22 0.89 -1.35 -0.44
-0.95 -2.86 -0.22 0.8 0.42 -0.12 0.63 0.33 -0.0 0.2 -0.36 -0.41
-0.18 -0.82 0.88 0.03 1.18 - -0.38 -1.75 -0.55 0.6 0.64 -0.76
- 0.45 1.21 -0.07 0.76 -0.15 -0.43 -0.19 -1.71 0.5 0.13 -1.49
-0.04 0.48 0.54 -0.25 -0.33 -0.33 -0.02 0.29 -0.52 -0.07 -0.05 -0.12
- 0.45 -0.58 1.22 0.28 -1.13 1.95 -0.98 -0.3 -1.45 - -1.24
-0.1 0.12 0.04 0.08 -0.06 -0.2 -0.05 0.26 0.12 0.07 -0.26 -0.1
- 2.51 0.65 - - - - 1.91 - - -0.0 -
-0.83 - 1.04 -0.14 0.06 -1.12 0.59 0.08 0.55 0.19 -0.0 -0.32
0.08 -0.07 0.01 0.97 1.02 -1.43 -0.39 -2.32 1.57 -2.89 -0.82 -
-1.71 0.1 -0.66 1.21 0.42 -0.68 -0.73 0.41 -0.21 0.35 0.57 -2.73
-0.64 -1.67 0.41 1.96 0.83 -0.2 -0.59 0.98 -1.23 -3.19 - -
- 0.79 0.39 - 0.56 -0.34 - 0.81 1.05 -0.71 -0.19 0.46
-2.07 0.24 -0.13 1.21 0.01 -1.63 1.44 - -0.03 0.0 -0.02 -1.56
-0.45 0.36 0.13 0.61 0.79 -1.35 -1.61 -0.61 -0.35 0.76 0.38 -1.06
-0.59 -0.07 -0.25 1.34 -2.84 -0.27 0.41 1.15 -1.44 0.9 - -1.91
- 0.23 0.91 -2.27 0.83 -0.2 - 0.77 1.04 0.06 -1.06 -0.32
1.12 -1.11 -0.56 1.39 0.42 - - -0.22 1.53 -0.7 - -1.49
- 1.35 - 0.81 1.12 - - 0.96 0.84 - -0.49 0.1
- - 0.84 1.73 1.3 0.06 - 0.77 0.08 - - -0.66
- 0.54 1.47 0.21 0.57 -0.91 -2.51 0.79 -1.27 -1.03 0.83 -
0.96 - -1.13 1.32 - 1.06 0.06 0.37 - -0.31 0.9 -
-2.24 -0.16 0.06 -0.24 0.61 -0.84 -0.24 -0.45 0.71 0.2 0.84 -0.39
1.1 0.42 0.08 0.94 -1.53 -0.93 0.45 0.84 -0.68 -1.3 -2.23 -1.92
-0.27 1.03 0.45 -1.16 1.68 - - 0.03 - 1.07 -0.02 -
-0.17 0.56 0.5 -2.37 0.97 -1.38 0.46 0.82 0.53 -1.75 -0.69 -2.49
-1.25 0.92 -0.2 0.44 -0.74 0.2 0.63 0.37 0.2 0.38 -2.15 -2.26
-0.02 0.41 -0.5 1.12 -1.03 0.35 0.35 -0.84 -0.41 0.13 -0.77 -0.38
- 1.68 - 1.73 1.87 - - - - -0.4 0.11 -
-0.12 -0.62 -0.17 0.66 0.3 -0.74 0.39 -0.25 0.16 0.07 0.07 -0.38
- 0.2 -0.85 1.53 0.61 0.71 -0.44 -1.92 -1.24 -0.71 0.15 0.13
- - - 1.97 - - 1.8 - - -0.38 1.94 -
- 0.97 0.5 0.74 -0.03 0.17 1.67 - 0.26 -2.29 -1.93 -
0.62 -0.08 -0.56 -0.27 0.36 -0.79 -0.72 -0.64 1.15 -2.12 0.94 -0.91
1.07 1.35 -0.18 - 1.56 0.17 - - 0.01 - 0.47 -
- -2.77 0.01 2.06 1.45 -0.19 -0.76 - -0.45 -0.55 0.1 -
0.61 -0.17 1.33 - 1.01 -0.29 -1.55 - -1.48 0.36 0.59 -0.41
- 1.47 -0.95 -0.33 -0.09 -0.17 -0.55 -1.19 -0.68 0.7 -1.36 1.22
- 0.48 1.19 -1.47 -0.83 -1.03 1.19 -0.49 0.41 -1.97 0.8 -0.76
- 2.05 - - 1.82 - - 1.79 - - - -0.19
0.7 0.23 0.47 0.11 0.46 -0.53 -1.96 -0.53 -2.07 0.53 0.82 -1.9
-0.32 0.02 0.12 0.1 0.1 -0.13 0.27 -0.07 0.17 -0.02 -0.19 -0.16
-0.13 -1.08 0.09 0.95 0.25 -0.68 0.77 -0.65 0.16 -0.13 0.05 -1.39
- - 1.25 - 1.6 - - 1.89 1.53 - - -
-1.18 0.65 -0.31 -0.26 1.03 0.17 -1.2 - -1.09 0.95 1.09 -2.19
- 1.45 -1.26 0.96 -0.46 -1.98 1.63 -0.04 -1.01 -0.19 -1.99 -2.17
- - 0.22 1.66 -1.42 -2.21 1.35 0.79 - 0.78 0.1 -
- - - - 2.52 - - - - - 1.77 1.51
0.04 0.04 0.0 0.05 -0.09 -0.03 -0.08 0.03 0.08 0.05 -0.04 -0.05
0.68 -0.41 0.38 0.94 -0.4 -1.06 -1.41 -0.91 0.05 0.76 0.38 -2.03
- -2.02 0.75 1.61 1.32 0.63 -0.4 0.29 -1.05 -1.51 - -2.48
-2.1 1.13 0.02 -0.34 0.17 -0.62 -1.09 0.64 -1.38 -0.95 0.07 1.01
0.97 -0.8 -1.28 1.25 - - 0.21 0.39 0.05 0.71 0.07 -1.04
- - -1.03 2.41 2.32 - - - - 0.25 - -
0.28 0.41 0.38 -0.97 1.26 - 0.29 -1.46 0.59 -0.99 0.71 -
-1.26 -0.03 0.4 -1.02 1.13 -0.57 -0.82 0.74 0.42 -0.4 0.19 -1.13
- - - - 2.91 - - - - - 2.17 -
- - - 1.97 - - - - 2.41 1.47 - -
0.23 - 0.12 0.89 -0.33 -1.6 0.56 0.57 -0.31 -0.37 0.23 0.06
- 0.09 1.12 0.58 1.19 -3.09 0.84 0.18 -2.26 -0.34 -0.09 -
-0.61 -0.46 0.37 -0.23 0.35 -0.63 -0.19 0.19 -0.1 0.35 0.38 0.05
- -0.69 -0.26 - 2.1 0.02 -1.21 - -0.88 0.03 1.02 0.29
- - -0.72 1.64 -0.37 - -0.53 -0.12 2.2 0.38 - -
- 1.39 - 2.17 1.81 - - - - -0.65 - -0.44
- 1.82 1.34 - 0.41 - - 1.01 - 1.37 - -
-1.53 -0.44 -0.2 0.32 1.02 -1.09 0.02 0.59 -0.16 -0.45 -0.29 0.42
0.03 - -1.22 2.31 1.84 - - - - 0.49 -0.72 -
- 1.83 - 2.59 0.02 - - - 0.51 - - -
- 1.93 - - - - - 3.04 - - - -
- 1.74 - - 0.52 - - 1.93 0.01 1.27 - -
0.1 1.68 0.37 - 0.69 - - 0.35 -0.41 -0.17 0.93 -
- 2.49 - - - - - 2.68 - - - -
0.15 -0.62 -0.52 0.19 1.59 - - -0.49 -1.12 1.21 0.72 -1.93
-0.43 0.05 -0.85 -0.3 0.47 -0.11 -0.85 0.47 0.51 -0.39 0.46 0.06
- 1.24 -0.01 0.06 1.33 0.1 - -1.6 -0.51 -0.42 0.97 -1.87
- 1.22 -0.47 1.54 -1.74 0.5 1.59 - -1.62 -1.22 -2.16 -1.64
0.21 0.5 1.04 0.67 0.98 - 0.63 - 0.59 -0.41 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.