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Heatmap: Cluster_20 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
9 h after dark
11 h after dark
-0.19 -1.09 -0.3 -0.18 1.18 -1.39 -0.76 -0.53 0.47 0.32 0.37 0.17
0.02 -0.05 0.05 0.03 0.21 0.04 0.15 0.0 -0.03 -0.19 -0.11 -0.17
-0.25 -0.07 0.71 -0.31 -0.02 -0.26 0.12 0.02 0.02 -0.05 -0.26 0.04
1.57 - - - 3.17 - - - - - - -
- -0.74 - -0.69 2.54 0.97 0.82 -0.12 - -2.59 -2.82 -
- -0.88 - -1.61 2.86 -0.47 0.03 -0.03 -0.25 -1.8 - -
- - - - 2.49 -0.7 -0.84 0.76 1.28 - -1.02 -0.78
0.19 0.11 1.54 -1.29 0.43 -2.11 -0.98 - - -0.63 1.23 0.47
-0.29 -0.38 0.73 -0.31 0.93 0.32 0.28 -0.59 -0.76 -0.4 -0.25 -0.47
-0.44 -0.13 0.88 0.28 0.39 -0.24 -0.12 -0.11 -0.35 0.03 -0.31 -0.55
-0.32 -0.32 -0.47 -0.67 1.34 -0.52 0.68 0.21 0.16 -0.67 -0.38 -0.87
-1.07 -0.64 -3.76 -1.09 1.61 -1.28 0.46 -0.12 -0.01 0.24 0.64 -0.25
-0.03 -0.33 0.57 -0.12 0.26 -0.67 -0.28 -0.23 -0.76 0.24 0.3 0.39
-1.51 - - 0.4 2.74 -2.19 -2.06 -1.01 -1.53 - 1.09 -2.19
0.12 -0.05 0.6 0.02 0.38 -0.3 -0.6 -0.25 0.0 -0.06 0.06 -0.32
-1.15 -1.07 - - 2.86 1.0 -1.71 -0.25 -0.59 - - -
-0.1 -0.13 0.0 -0.12 0.37 -0.17 0.05 0.11 -0.06 0.02 0.08 -0.15
-0.46 -0.06 -1.16 0.44 1.29 0.36 -0.26 -0.74 -0.1 -0.71 -0.33 0.01
0.27 -1.18 - -2.59 2.5 -0.87 -1.8 -1.34 -3.52 0.64 -0.07 -0.49
0.33 -0.3 0.41 -0.59 1.14 -1.51 0.47 -1.73 0.57 -0.7 -0.67 -0.05
-1.04 - - - 2.3 - -0.09 -1.86 1.41 0.67 -1.97 -0.19
- - - -0.84 2.9 -1.65 -0.13 -0.19 0.03 -1.82 -1.96 -1.73
-0.79 -0.83 0.5 -0.05 2.04 -0.78 -0.65 -0.81 -1.23 -1.07 -1.8 0.47
- - - - 3.45 - -0.84 - - - -0.98 -
-1.31 -2.18 -0.76 -0.25 2.66 - - -2.11 0.22 - 1.15 -
0.26 -1.33 0.95 -0.42 1.29 -1.77 -0.25 - -0.5 -0.54 0.69 0.17
- - - - 3.09 1.37 - - - -1.29 -0.98 -
-0.3 0.03 0.89 -0.55 0.32 -0.13 -0.65 0.11 -1.32 -0.21 0.1 0.5
-1.2 0.26 0.76 0.03 1.35 -0.22 0.07 -0.05 -1.27 -0.35 0.04 -
-2.91 -1.76 2.07 0.22 0.99 - 0.54 -3.71 0.28 -1.68 0.12 -3.67
- - - - 3.58 - - - - - - -
- -2.5 -2.7 -2.66 2.77 - 0.14 -2.5 0.5 0.74 -2.66 -2.39
- - 1.77 0.89 2.3 - - 0.28 -0.68 - - -
-1.22 -0.77 -0.85 0.09 1.45 0.44 -0.02 -1.26 -0.13 0.22 0.07 -0.43
-1.25 - - -0.7 2.28 1.15 -0.31 - 0.76 -1.1 -1.25 -1.01
-3.86 -0.83 0.73 -0.21 1.16 0.0 0.23 0.07 -0.54 0.06 -0.62 0.01
- - 2.27 - 2.04 -2.24 1.08 -2.31 -1.56 -2.25 - -
-1.47 -1.06 -0.83 -1.73 1.64 -0.25 0.47 -0.04 -1.0 0.72 0.1 -0.38
- -1.18 - 0.04 3.09 - - - -1.11 -0.94 -1.09 -0.85
- - -0.76 - 2.97 - - 0.65 - - - 1.0
-0.36 -1.32 - -1.92 2.02 -1.3 1.06 -0.86 0.79 -0.83 -0.53 -1.11
- -0.8 -1.88 - 3.24 - - - -0.87 - 0.21 -
- 1.3 - - 2.82 - 0.39 - - -0.75 - -0.78
- - -0.22 0.82 2.83 0.31 - 0.06 - - - -
- 0.81 - - 2.87 - 0.81 0.26 - - - -
- -0.94 - - 2.84 - 1.59 - -0.2 - -1.17 -
- - - - 3.15 -1.35 - - - - - 1.45
- - - - 3.58 - - - - - - -
0.25 - 2.07 - 2.72 - - - - - - -
-0.8 -0.66 0.65 -0.13 2.4 - -0.54 -1.63 -2.83 -0.27 -0.21 -2.56
- -1.75 1.71 -0.95 1.37 -0.51 -0.58 0.13 -0.82 -1.67 -0.69 0.45
0.28 -2.12 1.48 0.43 0.95 0.02 -1.58 -0.14 -0.34 - -0.97 -0.08
0.69 - - -0.44 2.68 -0.03 0.58 - - -1.36 - -1.39
-0.92 - -0.36 -2.04 2.91 -0.6 - -0.67 -0.31 -1.61 -0.91 -
- - - - 3.35 - - - - - 0.83 -
-0.22 -0.75 1.13 -0.52 0.71 -0.62 0.33 -0.72 -0.04 0.24 -1.82 0.1
-0.84 -0.46 1.28 -0.32 1.25 -4.34 -1.41 -0.94 0.17 0.5 -0.82 0.07
- - - 0.54 3.02 - - - - 0.35 0.21 -
-0.06 -3.75 -0.02 -4.1 2.14 -0.25 0.68 0.32 -0.4 -1.42 -0.7 -3.74
0.37 - - - 3.42 - - - - - - -
-0.15 -0.56 0.26 -0.24 0.76 0.05 -0.05 -0.2 -0.04 0.17 -0.22 -0.21
-0.27 0.06 -0.9 -0.08 1.83 -2.55 -0.11 -0.27 -0.29 -0.64 -1.4 0.41
-0.29 -0.38 0.45 0.51 0.25 -0.93 0.81 -0.13 -0.5 -0.81 -0.01 -0.05
-0.14 -0.98 0.69 0.21 0.62 0.39 0.66 -0.12 -0.17 -1.25 -1.13 -0.5
- - - -0.35 2.68 - 0.24 0.91 -1.97 -0.68 - -0.17
0.02 - - - 3.31 - - -0.78 - - -1.02 -
- - - - 3.24 - - - - - -0.09 0.7
- - -1.61 - 2.89 0.32 -1.13 - -0.6 - -0.57 0.27
0.52 -0.48 - 1.13 1.46 -0.12 -0.52 -0.61 -0.82 -0.05 -1.23 -0.54
0.28 -0.31 -0.26 0.02 0.69 -0.1 0.09 -0.03 0.04 -0.24 -0.15 -0.38
0.8 -0.2 0.94 -1.63 0.68 -1.42 -0.38 -1.1 0.24 -0.5 -0.95 0.61
- - - - 3.2 - -0.62 - -1.09 0.17 - -0.75
-0.01 0.41 0.77 0.4 0.92 -0.65 -0.29 -0.76 -0.66 -1.25 -0.58 0.01
-1.05 -0.4 2.15 0.14 0.91 - -1.66 -1.92 - - 0.91 -0.2
-0.94 -0.18 0.63 -0.43 1.37 0.58 -0.05 -0.14 -1.35 -1.63 0.2 -1.07
-0.58 -0.07 0.4 -0.16 0.95 -0.01 0.26 0.03 -0.95 -0.3 -0.46 -0.05
- - - - 3.58 - - - - - - -
-0.76 -0.64 1.58 -0.82 -0.43 -1.49 -1.58 0.04 -0.46 0.74 0.54 -0.15
-0.27 -0.24 0.04 -0.06 0.43 -0.22 0.16 -0.08 -0.22 0.28 0.17 -0.23
- - - - 2.85 - - - 0.39 - 1.42 -0.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.