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Heatmap: Cluster_90 (HCCA clusters)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
1 h after light
3 h after light
5 h after light
7 h after light
9 h after light
11 h after light
13 h after light
15 h after light
1 h after dark
3 h after dark
5 h after dark
7 h after dark
0.81 0.87 0.06 -0.04 -0.3 -1.27 -1.0 -1.07 -0.52 -0.33 -0.11 0.84
0.79 0.65 0.25 -0.08 -0.48 -0.84 -1.17 -0.06 -0.28 -0.29 0.04 0.28
1.46 1.46 0.51 -0.47 -1.97 -3.69 -2.95 -1.09 -1.34 -0.39 -0.0 0.33
1.37 1.64 0.45 -0.56 -2.21 -4.16 -3.57 -1.5 -1.58 -0.46 0.22 0.41
1.49 1.65 0.42 -0.84 -1.94 -3.23 -2.73 -1.64 -1.11 -0.88 -0.11 0.46
1.34 1.44 0.13 -0.25 -0.65 -2.23 -2.09 -1.93 -1.13 -0.42 -0.14 0.44
0.87 0.44 -0.08 -0.04 -0.83 -0.69 -0.43 -0.18 -0.1 0.04 0.01 0.16
1.08 0.89 0.72 -0.12 -0.84 -1.74 -1.55 -0.75 -0.57 -0.31 -0.06 0.29
1.0 0.59 0.13 -0.2 -1.23 -2.74 -1.57 -0.26 0.14 0.12 0.18 0.54
1.8 1.55 0.44 -0.76 -4.41 -4.35 -2.87 -2.09 -1.77 -0.67 0.12 0.24
0.62 0.55 0.16 -0.17 -0.59 -0.88 -0.61 -0.41 -0.04 0.07 0.07 0.38
1.0 0.7 0.35 -0.12 -0.7 -0.92 -0.79 -0.3 -0.41 -0.34 -0.07 0.21
1.56 1.23 0.29 -0.03 -0.16 -1.22 -1.55 -1.53 -1.62 -1.41 -0.74 0.25
1.2 0.85 0.5 -0.39 -1.33 -2.32 -1.68 -0.49 -0.56 -0.12 0.25 0.39
1.39 0.99 0.53 -0.36 -1.31 -2.0 -1.24 -0.33 -0.46 -0.52 -0.28 0.09
1.46 1.14 -0.19 0.03 -0.49 -1.59 -1.69 -1.11 -1.25 -0.7 0.07 0.31
1.66 0.99 0.3 -1.73 -3.53 -5.21 -2.43 -1.1 -0.64 0.14 0.33 0.63
1.04 0.79 0.23 -0.4 -1.26 -1.59 -0.79 -0.21 -0.01 0.1 -0.07 0.12
0.34 0.96 0.56 -0.16 -0.47 -1.51 -1.01 -0.23 -0.35 -0.01 0.19 0.09
1.09 0.97 0.05 -0.46 -0.87 -1.2 -0.81 -0.27 -0.3 -0.11 -0.07 0.1
1.14 1.07 -0.39 -0.35 -1.25 -1.32 -0.98 -0.28 -0.45 0.08 0.01 0.26
0.7 0.73 0.35 -0.22 -0.91 -1.39 -0.64 0.08 -0.09 -0.08 -0.04 0.16
1.04 0.69 0.42 -0.43 -0.73 -0.91 -0.58 -0.4 -0.33 -0.2 -0.11 0.13
0.91 0.92 0.42 -0.3 -0.46 -1.0 -1.04 -0.41 -0.49 -0.22 -0.09 0.14
1.13 1.02 0.04 -0.39 -0.67 -1.02 -0.62 -0.42 -0.41 -0.17 -0.2 -0.06
1.56 1.59 -0.03 0.34 -0.45 -1.92 -1.77 -1.56 -1.94 -1.58 -0.82 -0.01
0.79 0.82 0.04 -0.24 -0.57 -0.87 -0.78 0.04 -0.27 -0.05 -0.11 0.13
1.24 0.76 0.26 -0.03 -1.01 -1.91 -1.11 -0.22 -0.6 -0.56 0.01 0.41
0.91 0.77 -0.06 -0.41 -0.47 -0.54 -0.66 -0.5 -0.24 -0.03 -0.12 0.26
1.14 0.86 0.36 -0.38 -1.16 -1.81 -1.16 -0.47 -0.31 -0.05 0.08 0.27
0.97 1.41 0.0 -0.3 -0.27 -0.95 -1.13 -0.73 -0.97 -0.41 -0.18 0.04
0.65 0.6 0.03 -0.19 -0.48 -0.58 0.03 -0.23 -0.11 -0.22 -0.07 0.04
0.73 0.8 0.5 -0.09 -0.47 -1.08 -0.75 -0.24 -0.21 -0.17 -0.14 -0.07
0.72 0.73 0.18 0.2 -0.47 -1.31 -0.4 -0.13 -0.3 -0.35 -0.2 0.22
1.07 0.5 0.3 -0.6 -0.79 -0.58 -0.11 -0.05 -0.22 -0.33 -0.33 -0.0
0.65 0.46 0.19 -0.2 -0.34 -0.58 -0.53 -0.1 -0.18 -0.05 0.07 0.09
0.89 0.76 0.37 -0.12 -0.69 -1.28 -0.71 -0.61 -0.41 0.0 -0.09 0.33
1.19 1.11 0.19 -0.17 -0.79 -1.54 -1.1 -0.79 -0.82 -0.28 -0.02 0.26
1.08 0.67 0.11 -0.1 -0.47 -1.28 -1.11 -0.29 -0.82 -0.39 0.09 0.55
1.18 0.86 0.48 -0.2 -1.1 -2.09 -1.33 -0.69 -0.52 -0.42 0.03 0.56
0.97 0.78 0.14 -0.16 -0.42 -0.87 -0.42 -0.37 -0.39 -0.3 -0.23 0.11
1.16 0.76 0.19 -0.17 -0.74 -1.27 -0.91 -0.11 -0.39 -0.37 -0.06 0.09
0.84 1.45 0.47 0.29 -1.17 -3.04 -2.6 -1.17 -1.04 -0.36 0.1 0.44
1.1 0.99 0.52 -0.32 -1.19 -2.31 -0.84 -0.07 -0.64 -0.47 0.1 0.07
0.94 1.12 0.12 0.15 -0.41 -1.56 -1.46 -0.97 -1.27 -0.49 0.01 0.68
1.11 0.8 0.4 -0.22 -0.5 -0.92 -0.71 -0.21 -0.53 -0.52 -0.18 -0.1
1.04 0.54 0.34 -0.15 -1.26 -0.7 -0.75 -0.31 -0.31 -0.05 -0.06 0.21
1.06 1.05 0.34 0.37 -0.63 -2.17 -1.53 -0.82 -0.35 -0.21 -0.4 0.13
1.3 0.79 0.53 0.09 -1.73 -3.0 -1.58 -0.23 -0.4 -0.38 -0.03 0.25
0.83 0.64 0.19 -0.14 -0.77 -1.36 -0.67 -0.23 -0.12 0.07 0.09 0.17
1.62 1.22 0.24 -1.04 -2.54 -3.2 -2.07 -0.95 -0.7 -0.12 0.01 0.44
1.62 1.77 0.4 0.13 -0.43 -2.8 -3.29 -1.16 -2.87 -0.66 -1.45 -0.9
0.94 0.83 0.39 -0.18 -0.42 -0.73 -0.71 -0.47 -0.6 -0.3 -0.2 0.11
0.97 0.77 0.4 -0.08 -0.56 -1.69 -1.05 -0.51 -0.64 -0.08 0.02 0.37
1.36 0.69 0.39 -0.56 -1.53 -2.19 -0.94 -0.26 -0.24 -0.27 -0.0 0.3
1.2 0.78 0.18 -0.54 -1.37 -2.27 -1.34 -0.11 -0.29 -0.01 0.07 0.48
0.93 0.86 0.38 -0.32 -0.69 -1.69 -1.1 -0.41 -0.28 -0.09 -0.08 0.4
0.91 0.59 -0.08 -0.35 -0.29 -0.64 -0.47 -0.18 -0.09 0.04 -0.23 0.0
1.02 0.79 -0.06 0.04 -0.2 -0.83 -0.7 -0.66 -0.47 -0.23 -0.44 0.34
0.88 0.97 0.54 -0.12 -0.83 -1.58 -1.52 -0.92 -0.63 -0.08 0.1 0.49
1.41 1.38 0.15 -0.18 -0.61 -1.82 -0.98 -0.67 -0.7 -0.69 -0.76 -0.24
0.95 0.46 0.23 -0.5 -0.71 -0.76 -0.45 -0.15 -0.31 -0.11 0.03 0.3
1.1 0.99 0.06 0.22 -0.23 -1.43 -1.07 -0.71 -0.96 -0.23 -0.24 0.19
1.08 0.81 0.57 -0.42 -1.14 -1.29 -0.92 -0.32 -0.38 -0.25 -0.03 0.15
1.1 0.74 -0.07 -0.25 -1.07 -1.69 -0.85 -0.56 -0.6 0.05 0.18 0.62
0.96 0.72 -0.06 -0.39 -0.7 -1.93 -1.01 -0.59 -0.41 -0.22 0.39 0.78
0.97 0.86 0.21 -0.23 -0.41 -0.72 -0.49 -0.39 -0.41 -0.13 -0.32 -0.12
1.22 1.01 0.2 -0.55 -1.47 -3.09 -1.63 -0.6 -0.88 -0.08 0.29 0.72
1.11 0.5 -0.01 -0.39 -0.39 -0.4 -0.18 -0.1 -0.41 -0.33 -0.31 -0.03
1.11 0.88 0.32 -0.3 -0.73 -0.92 -0.47 0.01 -0.56 -0.56 -0.32 -0.13
1.05 0.74 0.33 -0.18 -0.93 -1.79 -1.02 -0.22 -0.26 -0.17 -0.0 0.32
1.44 1.5 0.86 -0.15 -0.9 -0.77 -1.12 -1.17 -1.58 -1.83 -1.31 -0.51
1.9 1.28 0.69 -0.11 -1.84 -6.13 -4.96 -1.75 -1.77 -1.24 -0.32 0.22
1.04 0.93 0.53 -0.21 -0.79 -1.93 -1.09 -0.72 -0.51 -0.11 0.01 0.24
1.46 0.77 0.24 -0.62 -1.28 -1.69 -0.77 -0.28 -0.32 -0.56 -0.23 0.33
0.84 0.51 0.08 -0.36 -0.86 -1.03 -0.5 -0.15 0.08 0.09 0.09 0.16
1.4 2.16 0.24 0.1 -1.78 - -2.79 -1.78 -1.66 -1.14 -1.61 -0.26
1.59 1.48 0.29 -0.29 -0.51 -1.3 -1.89 -1.25 -1.24 -1.76 -1.08 0.22
1.0 0.89 -0.04 -0.05 -0.58 -1.29 -1.03 -0.5 -0.3 0.03 -0.22 0.31
0.91 0.63 0.15 -0.28 -0.54 -1.1 -0.94 -0.49 -0.32 -0.0 0.14 0.43
0.94 0.71 0.4 -0.13 -0.3 -0.95 -1.31 -0.59 -0.64 -0.26 0.08 0.34
1.09 0.43 0.01 -0.35 -1.22 -2.02 -1.35 -0.36 -0.1 -0.01 0.33 0.76
0.6 0.52 0.25 -0.04 -0.37 -0.85 -0.79 -0.21 -0.15 -0.09 0.07 0.3
0.82 0.77 0.53 -0.06 -0.53 -0.85 -0.49 -0.21 -0.33 -0.5 -0.29 -0.02
1.31 0.72 0.17 -0.75 -1.65 -2.81 -1.33 -0.22 -0.48 -0.28 0.42 0.64
1.83 1.86 1.06 -0.43 -1.96 -5.5 - -5.72 -4.14 -2.51 -1.7 0.2
1.74 2.11 1.12 -0.27 -2.98 -5.5 -7.18 -4.17 -5.22 -3.77 -2.16 -0.34
1.2 1.14 0.29 -0.45 -1.76 -3.6 -2.99 -1.6 -0.94 -0.03 0.44 0.88

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.