Coexpression cluster: Cluster_90 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004812 aminoacyl-tRNA ligase activity 7.95% (7/88) 5.45 0.0 0.0
GO:0043038 amino acid activation 7.95% (7/88) 5.45 0.0 0.0
GO:0043039 tRNA aminoacylation 7.95% (7/88) 5.45 0.0 0.0
GO:0016875 ligase activity, forming carbon-oxygen bonds 7.95% (7/88) 5.45 0.0 0.0
GO:0140101 catalytic activity, acting on a tRNA 7.95% (7/88) 4.9 0.0 0.0
GO:0006418 tRNA aminoacylation for protein translation 6.82% (6/88) 5.33 0.0 0.0
GO:0006399 tRNA metabolic process 7.95% (7/88) 4.65 0.0 0.0
GO:0006520 cellular amino acid metabolic process 7.95% (7/88) 4.31 0.0 2e-06
GO:0016874 ligase activity 7.95% (7/88) 4.25 0.0 2e-06
GO:0034660 ncRNA metabolic process 7.95% (7/88) 4.27 0.0 2e-06
GO:0140098 catalytic activity, acting on RNA 7.95% (7/88) 3.84 1e-06 1e-05
GO:0019752 carboxylic acid metabolic process 7.95% (7/88) 3.81 1e-06 1.1e-05
GO:0043436 oxoacid metabolic process 7.95% (7/88) 3.76 1e-06 1.3e-05
GO:0006082 organic acid metabolic process 7.95% (7/88) 3.74 1e-06 1.3e-05
GO:0044281 small molecule metabolic process 10.23% (9/88) 2.79 6e-06 7.8e-05
GO:0003824 catalytic activity 27.27% (24/88) 1.34 1.4e-05 0.000163
GO:0016070 RNA metabolic process 7.95% (7/88) 2.97 3.2e-05 0.000351
GO:0008144 drug binding 12.5% (11/88) 1.86 0.000221 0.002203
GO:0043167 ion binding 17.05% (15/88) 1.51 0.000214 0.002244
GO:0043168 anion binding 13.64% (12/88) 1.67 0.000372 0.003514
GO:0097367 carbohydrate derivative binding 12.5% (11/88) 1.66 0.000706 0.004447
GO:0030554 adenyl nucleotide binding 11.36% (10/88) 1.77 0.00069 0.004497
GO:0032555 purine ribonucleotide binding 12.5% (11/88) 1.7 0.00056 0.004603
GO:0017076 purine nucleotide binding 12.5% (11/88) 1.69 0.000585 0.004607
GO:0032553 ribonucleotide binding 12.5% (11/88) 1.66 0.000688 0.004645
GO:0032559 adenyl ribonucleotide binding 11.36% (10/88) 1.77 0.000677 0.004741
GO:0036094 small molecule binding 13.64% (12/88) 1.6 0.000556 0.004781
GO:0035639 purine ribonucleoside triphosphate binding 12.5% (11/88) 1.71 0.000532 0.004784
GO:0008152 metabolic process 20.45% (18/88) 1.2 0.000661 0.004805
GO:0005524 ATP binding 11.36% (10/88) 1.78 0.00064 0.004839
GO:0006139 nucleobase-containing compound metabolic process 10.23% (9/88) 1.84 0.000925 0.005638
GO:0003674 molecular_function 36.36% (32/88) 0.75 0.001082 0.006391
GO:0046483 heterocycle metabolic process 10.23% (9/88) 1.75 0.001434 0.007742
GO:0000166 nucleotide binding 12.5% (11/88) 1.54 0.001396 0.007758
GO:1901265 nucleoside phosphate binding 12.5% (11/88) 1.54 0.001396 0.007758
GO:0006725 cellular aromatic compound metabolic process 10.23% (9/88) 1.74 0.001487 0.007807
GO:1901360 organic cyclic compound metabolic process 10.23% (9/88) 1.72 0.001642 0.008386
GO:0090304 nucleic acid metabolic process 7.95% (7/88) 2.02 0.00174 0.008656
GO:1901564 organonitrogen compound metabolic process 11.36% (10/88) 1.5 0.002745 0.013305
GO:0044238 primary metabolic process 15.91% (14/88) 1.2 0.00288 0.013606
GO:0034641 cellular nitrogen compound metabolic process 10.23% (9/88) 1.56 0.003376 0.015563
GO:0071704 organic substance metabolic process 15.91% (14/88) 1.14 0.004165 0.018744
GO:0070567 cytidylyltransferase activity 1.14% (1/88) 7.13 0.007112 0.029223
GO:0006433 prolyl-tRNA aminoacylation 1.14% (1/88) 7.13 0.007112 0.029223
GO:0004827 proline-tRNA ligase activity 1.14% (1/88) 7.13 0.007112 0.029223
GO:1901363 heterocyclic compound binding 14.77% (13/88) 1.09 0.007423 0.029228
GO:0097159 organic cyclic compound binding 14.77% (13/88) 1.09 0.007423 0.029228
GO:0008150 biological_process 23.86% (21/88) 0.8 0.00677 0.029758
GO:0006807 nitrogen compound metabolic process 13.64% (12/88) 1.09 0.009971 0.038461
GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor 1.14% (1/88) 6.55 0.01065 0.040256
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_1 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_70 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_103 0.02 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_12 0.025 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_27 0.024 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_137 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_170 0.021 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_34 0.022 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_77 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_96 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_224 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_24 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_227 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_400 0.022 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_113 0.02 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_146 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_352 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_162 0.023 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_161 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_175 0.021 Orthogroups_2024-Update Compare
Sequences (88) (download table)

InterPro Domains

GO Terms

Family Terms