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  5. Mp2g04330.1

Mp2g04330.1


Description : PHD finger transcription factor


Gene families : OG_42_0001586 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001586_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp2g04330.1
Cluster HCAA Clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
At2g27980 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.04 Orthogroups_2024-Update
Bradi1g52407 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.04 Orthogroups_2024-Update
MA_63450g0010 No alias (at2g37520 : 498.0) Acyl-CoA N-acyltransferase with... 0.03 Orthogroups_2024-Update
PSME_00002239-RA No alias (at2g37520 : 509.0) Acyl-CoA N-acyltransferase with... 0.03 Orthogroups_2024-Update
Seita.4G001200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc10g083800 No alias RING/FYVE/PHD zinc finger protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
CC GO:0033643 host cell part IEP Predicted GO
CC GO:0033646 host intracellular part IEP Predicted GO
CC GO:0033647 host intracellular organelle IEP Predicted GO
CC GO:0033648 host intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0042025 host cell nucleus IEP Predicted GO
CC GO:0044217 other organism part IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 1112 1154
IPR032308 Jas 1016 1084
IPR032308 Jas 838 900
No external refs found!