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  5. Mp2g06500.1

Mp2g06500.1


Description : class III/Trithorax histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG_42_0004784 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004784_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp2g06500.1
Cluster HCAA Clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
447947 No alias SET domain protein 2 0.04 Orthogroups_2024-Update
Bradi3g15410 No alias SET domain protein 2 0.08 Orthogroups_2024-Update
Glyma.06G301900 No alias SET domain protein 2 0.03 Orthogroups_2024-Update
Glyma.12G196800 No alias SET domain protein 2 0.04 Orthogroups_2024-Update
Glyma.13G305000 No alias SET domain protein 2 0.04 Orthogroups_2024-Update
Kfl00289_0080 kfl00289_0080_v1.1 (at4g15180 : 615.0) SET domain protein 2 (SDG2);... 0.02 Orthogroups_2024-Update
MA_102811g0010 No alias (at4g15180 : 414.0) SET domain protein 2 (SDG2);... 0.04 Orthogroups_2024-Update
PSME_00014211-RA No alias (at4g15180 : 988.0) SET domain protein 2 (SDG2);... 0.03 Orthogroups_2024-Update
Pp1s311_17V6 No alias set domain protein 0.04 Orthogroups_2024-Update
Seita.6G042300.1 No alias class-III histone methyltransferase *(Trx) 0.06 Orthogroups_2024-Update
Sobic.007G062800.1 No alias class-III histone methyltransferase *(Trx) 0.08 Orthogroups_2024-Update
Solyc07g052940 No alias Histone-lysine N-methyltransferase (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001214 SET_dom 2553 2612
IPR001878 Znf_CCHC 35 50
No external refs found!