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  5. Mp4g01560.1

Mp4g01560.1


Description : G2-like GARP transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp4g01560.1
Cluster HCAA Clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
405399 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
A4A49_09160 No alias transcription repressor kan1 0.03 Orthogroups_2024-Update
A4A49_31971 No alias myb family transcription factor phl11 0.02 Orthogroups_2024-Update
AC233960.1_FG003 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
AC234155.1_FG002 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g63530 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g36710 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g44930 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G701218 No alias myb-related protein 1 0.02 Orthogroups_2024-Update
Glyma.01G009600 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.01G049100 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G207300 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G079000 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os07g25710 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g01480 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00021090-RA No alias (at5g16560 : 147.0) Encodes a KANADI protein (KAN) that... 0.04 Orthogroups_2024-Update
Potri.015G031600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s141_97V6 No alias myb family transcription factor 0.04 Orthogroups_2024-Update
Pp1s143_30V6 No alias transfactor-like protein 0.02 Orthogroups_2024-Update
Pp1s166_69V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s37_226V6 No alias F18A5.30; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Sobic.001G386700.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G137300.2 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G178000.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Sopen06g003060 No alias MYB-CC type transfactor, LHEQLE motif 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 141 188
IPR001005 SANT/Myb 48 98
No external refs found!