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  5. Mp6g21090.2

Mp6g21090.2


Description : PHD finger transcription factor


Gene families : OG_42_0000522 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000522_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp6g21090.2
Cluster HCAA Clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
At4g14920 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Orthogroups_2024-Update
Bradi1g08727 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Orthogroups_2024-Update
Bradi5g27517 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Orthogroups_2024-Update
Brara.J00362.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.J01248.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G150786 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Orthogroups_2024-Update
Glyma.01G238200 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.03 Orthogroups_2024-Update
Glyma.01G238300 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Orthogroups_2024-Update
Glyma.11G005300 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.06 Orthogroups_2024-Update
Glyma.11G005500 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.02 Orthogroups_2024-Update
Glyma.12G228700 No alias Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... 0.05 Orthogroups_2024-Update
HORVU2Hr1G054040.19 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os03g53630 No alias PHD finger family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_14500g0010 No alias (at1g05380 : 422.0) Acyl-CoA N-acyltransferase with... 0.04 Orthogroups_2024-Update
PSME_00020218-RA No alias (at5g58610 : 358.0) PHD finger transcription factor,... 0.02 Orthogroups_2024-Update
PSME_00027563-RA No alias (at1g05380 : 299.0) Acyl-CoA N-acyltransferase with... 0.05 Orthogroups_2024-Update
Seita.3G002500.1 No alias component *(IDM1) of ROS1-recruitment complex 0.05 Orthogroups_2024-Update
Seita.9G093700.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR008395 Agenet-like_dom 37 119
IPR032308 Jas 766 836
IPR019787 Znf_PHD-finger 878 919
No external refs found!