1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp8g15320.1

Mp8g15320.1


Description : transcription factor (HUA2)


Gene families : OG_42_0001430 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001430_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp8g15320.1
Cluster HCAA Clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
404055 No alias Tudor/PWWP/MBT domain-containing protein 0.02 Orthogroups_2024-Update
Bradi1g19370 No alias Tudor/PWWP/MBT domain-containing protein 0.05 Orthogroups_2024-Update
Bradi1g61937 No alias Tudor/PWWP/MBT domain-containing protein 0.03 Orthogroups_2024-Update
Bradi3g12902 No alias Tudor/PWWP/MBT domain-containing protein 0.04 Orthogroups_2024-Update
Brara.B03729.1 No alias HUA2-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G062969 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.02G149200 No alias Tudor/PWWP/MBT domain-containing protein 0.05 Orthogroups_2024-Update
Glyma.10G024500 No alias Tudor/PWWP/MBT domain-containing protein 0.04 Orthogroups_2024-Update
Glyma.11G100400 No alias Tudor/PWWP/MBT domain-containing protein 0.04 Orthogroups_2024-Update
Glyma.12G026600 No alias Tudor/PWWP/MBT domain-containing protein 0.02 Orthogroups_2024-Update
Kfl00285_0010 kfl00285_0010_v1.1 (at5g23150 : 115.0) Putative transcription factor.... 0.03 Orthogroups_2024-Update
MA_3338g0010 No alias (at5g23150 : 182.0) Putative transcription factor.... 0.02 Orthogroups_2024-Update
PSME_00015772-RA No alias (at5g23150 : 301.0) Putative transcription factor.... 0.03 Orthogroups_2024-Update
Seita.2G414600.1 No alias HUA2-type transcription factor 0.06 Orthogroups_2024-Update
Seita.6G001200.1 No alias HUA2-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G365900.1 No alias HUA2-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G000100.1 No alias HUA2-type transcription factor 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000313 PWWP_dom 22 107
No external refs found!