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  5. Mp8g15990.1

Mp8g15990.1


Description : serine-tRNA ligase


Gene families : OG_42_0003118 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha: Mp8g15990.1
Cluster HCAA Clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Brara.B03543.1 No alias serine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond 0.02 Orthogroups_2024-Update
Cre03.g189400 No alias seryl-tRNA synthetase / serine--tRNA ligase 0.02 Orthogroups_2024-Update
Seita.9G503900.1 No alias serine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond 0.02 Orthogroups_2024-Update
Sopen01g042420 No alias tRNA synthetase class II core domain (G, H, P, S and T) 0.02 Orthogroups_2024-Update
evm.model.contig_2110.1 No alias (at5g27470 : 511.0) seryl-tRNA synthetase / serine--tRNA... 0.01 Orthogroups_2024-Update
evm.model.tig00020610.57 No alias (o81983|sys_helan : 467.0) Seryl-tRNA synthetase (EC... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA 16Dec
MF GO:0004812 aminoacyl-tRNA ligase activity IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
BP GO:0006418 tRNA aminoacylation for protein translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002314 aa-tRNA-synt_IIb 222 409
IPR015866 Ser-tRNA-synth_1_N 1 111
No external refs found!