0.04 Orthogroups_2024-Update Solyc09g009950 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update Solyc10g008570 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.05 Orthogroups_2024-Update Solyc10g008590 No alias Pentatricopeptide repeat-containing protein, putative... 0.03 Orthogroups_2024-Update Solyc10g080220 No alias Pentatricopeptide repeat superfamily protein (AHRD V3.3... 0.02 Orthogroups_2024-Update Solyc11g005960 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update Solyc11g011860 No alias Pentatricopeptide repeat-containing protein family (AHRD... 0.02 Orthogroups_2024-Update Solyc11g067210 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update Solyc11g071370 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.04 Orthogroups_2024-Update Solyc12g042400 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update Sopen01g002910 No alias PPR repeat 0.04 Orthogroups_2024-Update Sopen01g032720 No alias PPR repeat family 0.02 Orthogroups_2024-Update Sopen01g036300 No alias PPR repeat family 0.03 Orthogroups_2024-Update Sopen01g037380 No alias PPR repeat 0.02 Orthogroups_2024-Update Sopen01g038950 No alias PPR repeat 0.05 Orthogroups_2024-Update Sopen01g054250 No alias PPR repeat family 0.05 Orthogroups_2024-Update Sopen02g015160 No alias PPR repeat 0.02 Orthogroups_2024-Update Sopen02g025050 No alias PPR repeat family 0.03 Orthogroups_2024-Update Sopen02g033370 No alias PPR repeat family 0.04 Orthogroups_2024-Update Sopen02g039140 No alias PPR repeat 0.03 Orthogroups_2024-Update Sopen03g002990 No alias PPR repeat family 0.04 Orthogroups_2024-Update Sopen03g003770 No alias PPR repeat family 0.04 Orthogroups_2024-Update Sopen03g028590 No alias PPR repeat family 0.03 Orthogroups_2024-Update Sopen03g029160 No alias PPR repeat family 0.02 Orthogroups_2024-Update Sopen03g034990 No alias PPR repeat family 0.03 Orthogroups_2024-Update Sopen03g038010 No alias PPR repeat 0.02 Orthogroups_2024-Update Sopen06g022100 No alias PPR repeat family 0.02 Orthogroups_2024-Update Sopen06g024560 No alias PPR repeat family 0.03 Orthogroups_2024-Update Sopen06g035950 No alias PPR repeat family 0.05 Orthogroups_2024-Update Sopen07g001950 No alias PPR repeat 0.03 Orthogroups_2024-Update Sopen07g017190 No alias PPR repeat family 0.02 Orthogroups_2024-Update Sopen07g022420 No alias PPR repeat family 0.05 Orthogroups_2024-Update Sopen07g026910 No alias PPR repeat family 0.02 Orthogroups_2024-Update Sopen09g004700 No alias PPR repeat 0.02 Orthogroups_2024-Update Sopen10g004410 No alias PPR repeat family 0.04 Orthogroups_2024-Update Sopen11g001900 No alias PPR repeat 0.05 Orthogroups_2024-Update Sopen11g009180 No alias PPR repeat 0.02 Orthogroups_2024-Update Sopen11g017250 No alias PPR repeat family 0.02 Orthogroups_2024-Update Sopen11g024970 No alias PPR repeat family 0.04 Orthogroups_2024-Update Sopen11g026910 No alias PPR repeat family 0.05 Orthogroups_2024-Update
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
At5g47740 details
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  5. At5g47740

At5g47740


Description : Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JYN2]


Gene families : OG_42_0007836 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007836_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


InterPro domains Description Start Stop
IPR032867 DYW_dom 548 640
IPR002885 Pentatricopeptide_repeat 233 263
IPR002885 Pentatricopeptide_repeat 207
Type Description Actions
Neighborhood Arabidopsis release: At5g47740
Cluster HCCA clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Glyma.15G121000 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G003900 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019211 phosphatase activator activity IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP225 Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006016 UspA 44 190
No external refs found!