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  5. Solyc04g014830

Solyc04g014830


Description : GRAS family transcription factor (AHRD V3.3 *** G7JLR5_MEDTR)


Gene families : OG_42_0001530 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001530_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g014830
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
A4A49_17765 No alias scarecrow-like protein 13 0.03 Orthogroups_2024-Update
A4A49_25279 No alias scarecrow-like transcription factor pat1 0.03 Orthogroups_2024-Update
Potri.006G016200 No alias SCARECROW-like 13 0.02 Orthogroups_2024-Update
Potri.016G009700 No alias SCARECROW-like 13 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003713 transcription coactivator activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005202 TF_GRAS 196 566
No external refs found!