Solyc04g054910

Description : Ethylene-responsive element binding-factor (AHRD V3.3 *** K9UTK3_JATCU)

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc04g054910
Cluster	HCCA clusters: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03629	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
At1g12610	No alias	Dehydration-responsive element-binding protein 1F...	0.04	Orthogroups_2024-Update
At1g12630	No alias	Ethylene-responsive transcription factor ERF027...	0.03	Orthogroups_2024-Update
At1g19210	No alias	Ethylene-responsive transcription factor ERF017...	0.04	Orthogroups_2024-Update
Bradi3g24000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi5g08380	No alias	related to AP2 6l	0.03	Orthogroups_2024-Update
Bradi5g17610	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.A00380.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Brara.C01398.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.G02253.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.02	Orthogroups_2024-Update
Brara.I01326.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.J00833.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.J02528.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Glyma.01G074200	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.04G217400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G110000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.12G162700	No alias	ethylene responsive element binding factor 4	0.04	Orthogroups_2024-Update
Glyma.15G079100	No alias	ethylene responsive element binding factor 2	0.03	Orthogroups_2024-Update
Glyma.20G070100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.20G203700	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
HORVU7Hr1G026940.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
LOC_Os09g11460	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g11480	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_166248g0020	No alias	(at4g17500 : 128.0) Encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00050917-RA	No alias	(at1g74930 : 122.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
PSME_00053215-RA	No alias	(at4g17490 : 92.0) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00053842-RA	No alias	(at5g21960 : 117.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.002G201600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s162_92V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G319700.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.006G240500.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
Solyc02g077360	No alias	Ethylene Response Factor B.2	0.03	Orthogroups_2024-Update
Solyc08g078190	No alias	ethylene-responsive transcription factor	0.03	Orthogroups_2024-Update
Solyc12g009240	No alias	Ethylene-responsive transcription factor ERF017 (AHRD...	0.03	Orthogroups_2024-Update
Sopen00g003270	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen03g024400	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen08g026680	No alias	AP2 domain	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	IEP	Predicted GO
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005516	calmodulin binding	IEP	Predicted GO
BP	GO:0006643	membrane lipid metabolic process	IEP	Predicted GO
BP	GO:0006664	glycolipid metabolic process	IEP	Predicted GO
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predicted GO
MF	GO:0008759	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity	IEP	Predicted GO
BP	GO:0009245	lipid A biosynthetic process	IEP	Predicted GO
BP	GO:0009247	glycolipid biosynthetic process	IEP	Predicted GO
BP	GO:0009311	oligosaccharide metabolic process	IEP	Predicted GO
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Predicted GO
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Predicted GO
MF	GO:0019213	deacetylase activity	IEP	Predicted GO
CC	GO:0031248	protein acetyltransferase complex	IEP	Predicted GO
MF	GO:0042802	identical protein binding	IEP	Predicted GO
MF	GO:0042803	protein homodimerization activity	IEP	Predicted GO
CC	GO:0043189	H4/H2A histone acetyltransferase complex	IEP	Predicted GO
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predicted GO
BP	GO:0046493	lipid A metabolic process	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Predicted GO
MF	GO:0060590	ATPase regulator activity	IEP	Predicted GO
BP	GO:1901269	lipooligosaccharide metabolic process	IEP	Predicted GO
BP	GO:1901271	lipooligosaccharide biosynthetic process	IEP	Predicted GO
CC	GO:1902493	acetyltransferase complex	IEP	Predicted GO
CC	GO:1902562	H4 histone acetyltransferase complex	IEP	Predicted GO
BP	GO:1903509	liposaccharide metabolic process	IEP	Predicted GO
CC	GO:1990234	transferase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	76	125

External Links

No external refs found!

Solyc04g054910

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation