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  5. evm.model.tig00000498.35

evm.model.tig00000498.35


Description : no hits & (original description: no original description)


Gene families : OG_42_0000540 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000540_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000498.35
Cluster HCCA clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
evm.model.tig00001057.22 No alias (at1g27320 : 117.0) Encodes a histidine kinases, a... 0.02 Orthogroups_2024-Update
evm.model.tig00001331.12 No alias (at5g35750 : 94.0) Encodes histidine kinase AHK2.;... 0.02 Orthogroups_2024-Update
evm.model.tig00020553.260 No alias (at2g01830 : 120.0) Histidine kinase: cytokinin-binding... 0.02 Orthogroups_2024-Update
evm.model.tig00020603.78 No alias (at2g01830 : 116.0) Histidine kinase: cytokinin-binding... 0.02 Orthogroups_2024-Update
evm.model.tig00020943.57 No alias (o81122|etr1_maldo : 128.0) Ethylene receptor (EC... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA InterProScan predictions
BP GO:0000160 phosphorelay signal transduction system IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009187 cyclic nucleotide metabolic process IEP Predicted GO
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016849 phosphorus-oxygen lyase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013655 PAS_fold_3 197 266
IPR003594 HATPase_C 403 542
IPR003661 HisK_dim/P 297 360
IPR001789 Sig_transdc_resp-reg_receiver 591 671
No external refs found!