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  5. evm.model.tig00000615.50

evm.model.tig00000615.50


Description : (at1g48090 : 115.0) calcium-dependent lipid-binding family protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Protein of unknown function DUF946 (InterPro:IPR009291), Vacuolar protein sorting-associated protein (InterPro:IPR009543), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973); BEST Arabidopsis thaliana protein match is: pleckstrin homology (PH) domain-containing protein (TAIR:AT4G17140.2); Has 2732 Blast hits to 1481 proteins in 212 species: Archae - 2; Bacteria - 15; Metazoa - 1181; Fungi - 466; Plants - 461; Viruses - 0; Other Eukaryotes - 607 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description)


Gene families : OG_42_0000864 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000615.50
Cluster HCCA clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
440026 No alias calcium-dependent lipid-binding family protein 0.02 Orthogroups_2024-Update
444980 No alias calcium-dependent lipid-binding family protein 0.03 Orthogroups_2024-Update
At1g48090 No alias calcium-dependent lipid-binding family protein... 0.01 Orthogroups_2024-Update
Kfl00451_0090 kfl00451_0090_v1.1 (at1g48090 : 1719.0) calcium-dependent lipid-binding... 0.03 Orthogroups_2024-Update
Pp1s17_376V6 No alias vacuolar protein sorting-associated 0.01 Orthogroups_2024-Update
Sobic.001G293700.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc09g009350 No alias calcium-dependent lipid-binding family protein (AHRD... 0.01 Orthogroups_2024-Update
Sopen09g004100 No alias N-terminal region of Chorein, a TM vesicle-mediated sorter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0032947 protein-containing complex scaffold activity IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR031642 VPS13_mid_rpt 570 681
IPR031646 VPS13_N2 144 202
IPR031645 VPS13_C 2215 2307
IPR031645 VPS13_C 2320 2368
IPR009543 SHR-BD 1933 1985
IPR009543 SHR-BD 1781 1892
IPR026854 VPS13_N 2 112
No external refs found!