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  5. evm.model.tig00001049.14

evm.model.tig00001049.14


Description : (at1g47270 : 107.0) Member of TLP family; tubby like protein 6 (TLP6); FUNCTIONS IN: phosphoric diester hydrolase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 2 (TAIR:AT2G18280.2). & (reliability: 214.0) & (original description: no original description)


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00001049.14
Cluster HCCA clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
83983 No alias tubby like protein 3 0.01 Orthogroups_2024-Update
Bradi1g18380 No alias tubby like protein 3 0.01 Orthogroups_2024-Update
Brara.G00196.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G062154 No alias tubby like protein 7 0.02 Orthogroups_2024-Update
GRMZM2G108228 No alias tubby like protein 10 0.02 Orthogroups_2024-Update
Glyma.13G269600 No alias tubby like protein 7 0.02 Orthogroups_2024-Update
HORVU3Hr1G061930.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os05g36190 No alias OsFBT7 - F-box and tubby domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_132704g0010 No alias (at2g47900 : 535.0) Member of TLP family; tubby like... 0.01 Orthogroups_2024-Update
Potri.008G195200 No alias tubby like protein 3 0.02 Orthogroups_2024-Update
Seita.5G267600.1 No alias TUB-type transcription factor 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
BP GO:0003352 regulation of cilium movement IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0032879 regulation of localization IEP Predicted GO
BP GO:0032886 regulation of microtubule-based process IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051270 regulation of cellular component movement IEP Predicted GO
BP GO:0060632 regulation of microtubule-based movement IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000007 Tubby_C 151 266
IPR000007 Tubby_C 287 331
No external refs found!