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  5. evm.model.tig00020944.12

evm.model.tig00020944.12


Description : (p80028|trxh_chlre : 100.0) Thioredoxin H-type (TRX-H) (Thioredoxin CH1) - Chlamydomonas reinhardtii & (at3g51030 : 84.0) encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.; thioredoxin H-type 1 (TRX1); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 18017 Blast hits to 17697 proteins in 2965 species: Archae - 232; Bacteria - 9905; Metazoa - 1876; Fungi - 909; Plants - 1960; Viruses - 5; Other Eukaryotes - 3130 (source: NCBI BLink). & (reliability: 168.0) & (original description: no original description)


Gene families : OG_42_0000297 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00020944.12
Cluster HCCA clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
438048 No alias C-terminal cysteine residue is changed to a serine 1 0.01 Orthogroups_2024-Update
A4A49_19093 No alias thioredoxin h-type 0.02 Orthogroups_2024-Update
Bradi1g55100 No alias thioredoxin H-type 1 0.02 Orthogroups_2024-Update
Brara.J00593.1 No alias protein-S-nitrosothiol reductase *(TRX5) & H-type... 0.01 Orthogroups_2024-Update
Glyma.01G170300 No alias thioredoxin H-type 1 0.02 Orthogroups_2024-Update
HORVU2Hr1G056360.4 No alias protein-S-nitrosothiol reductase *(TRX5) & H-type... 0.02 Orthogroups_2024-Update
MA_5229g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00007835-RA No alias (p29449|trxh1_tobac : 155.0) Thioredoxin H-type 1... 0.01 Orthogroups_2024-Update
PSME_00028000-RA No alias (at5g42980 : 119.0) encodes a cytosolic thioredoxin that... 0.01 Orthogroups_2024-Update
Potri.016G138800 No alias thioredoxin H-type 9 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 8 105
No external refs found!