Coexpression cluster: Cluster_34 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0098662 inorganic cation transmembrane transport 3.74% (4/107) 4.85 1.1e-05 0.000955
GO:0098655 cation transmembrane transport 3.74% (4/107) 4.85 1.1e-05 0.000955
GO:0098660 inorganic ion transmembrane transport 3.74% (4/107) 4.85 1.1e-05 0.000955
GO:0022904 respiratory electron transport chain 1.87% (2/107) 7.85 1.9e-05 0.000978
GO:0034220 ion transmembrane transport 3.74% (4/107) 4.68 1.8e-05 0.001158
GO:1990204 oxidoreductase complex 2.8% (3/107) 5.44 4.2e-05 0.001862
GO:0044429 mitochondrial part 2.8% (3/107) 5.19 7.3e-05 0.001915
GO:0048037 cofactor binding 6.54% (7/107) 2.81 6.7e-05 0.001969
GO:0003674 molecular_function 38.32% (41/107) 0.83 6.2e-05 0.002026
GO:0098803 respiratory chain complex 1.87% (2/107) 7.27 5.6e-05 0.002089
GO:0055114 oxidation-reduction process 7.48% (8/107) 2.45 0.000116 0.002182
GO:1902600 proton transmembrane transport 2.8% (3/107) 4.98 0.000115 0.002319
GO:0022900 electron transport chain 1.87% (2/107) 6.85 0.000111 0.002431
GO:0006812 cation transport 4.67% (5/107) 3.43 0.000104 0.002484
GO:0098800 inner mitochondrial membrane protein complex 1.87% (2/107) 6.53 0.000184 0.003232
GO:0044455 mitochondrial membrane part 1.87% (2/107) 6.27 0.000276 0.004531
GO:0009126 purine nucleoside monophosphate metabolic process 2.8% (3/107) 4.23 0.000552 0.005373
GO:0009161 ribonucleoside monophosphate metabolic process 2.8% (3/107) 4.23 0.000552 0.005373
GO:0009167 purine ribonucleoside monophosphate metabolic process 2.8% (3/107) 4.23 0.000552 0.005373
GO:0015672 monovalent inorganic cation transport 2.8% (3/107) 4.19 0.000597 0.005414
GO:0009123 nucleoside monophosphate metabolic process 2.8% (3/107) 4.19 0.000597 0.005414
GO:0015985 energy coupled proton transport, down electrochemical gradient 1.87% (2/107) 5.85 0.000512 0.005607
GO:0015986 ATP synthesis coupled proton transport 1.87% (2/107) 5.85 0.000512 0.005607
GO:0009141 nucleoside triphosphate metabolic process 2.8% (3/107) 4.15 0.000645 0.005652
GO:0098798 mitochondrial protein complex 1.87% (2/107) 6.04 0.000385 0.005954
GO:0009144 purine nucleoside triphosphate metabolic process 2.8% (3/107) 4.27 0.000508 0.006078
GO:0009199 ribonucleoside triphosphate metabolic process 2.8% (3/107) 4.27 0.000508 0.006078
GO:0009205 purine ribonucleoside triphosphate metabolic process 2.8% (3/107) 4.27 0.000508 0.006078
GO:0008150 biological_process 26.17% (28/107) 0.94 0.000424 0.006198
GO:0046034 ATP metabolic process 2.8% (3/107) 4.31 0.000468 0.006472
GO:0009259 ribonucleotide metabolic process 2.8% (3/107) 3.94 0.000982 0.008073
GO:0009150 purine ribonucleotide metabolic process 2.8% (3/107) 3.94 0.000982 0.008073
GO:0005488 binding 25.23% (27/107) 0.88 0.001043 0.008311
GO:0019693 ribose phosphate metabolic process 2.8% (3/107) 3.85 0.001186 0.008913
GO:0006163 purine nucleotide metabolic process 2.8% (3/107) 3.85 0.001186 0.008913
GO:0051234 establishment of localization 7.48% (8/107) 1.91 0.001346 0.009571
GO:0006810 transport 7.48% (8/107) 1.92 0.001312 0.009586
GO:0051179 localization 7.48% (8/107) 1.9 0.001435 0.00968
GO:0072521 purine-containing compound metabolic process 2.8% (3/107) 3.76 0.001415 0.009791
GO:0051540 metal cluster binding 2.8% (3/107) 3.71 0.001581 0.010144
GO:0051536 iron-sulfur cluster binding 2.8% (3/107) 3.71 0.001581 0.010144
GO:0055085 transmembrane transport 5.61% (6/107) 2.22 0.001881 0.010993
GO:0017144 drug metabolic process 2.8% (3/107) 3.63 0.001854 0.011081
GO:0019725 cellular homeostasis 2.8% (3/107) 3.63 0.001854 0.011081
GO:0045454 cell redox homeostasis 2.8% (3/107) 3.63 0.001854 0.011081
GO:0008152 metabolic process 17.76% (19/107) 0.99 0.002751 0.015393
GO:0015979 photosynthesis 1.87% (2/107) 4.68 0.002718 0.01554
GO:0042592 homeostatic process 2.8% (3/107) 3.41 0.00284 0.015561
GO:0051537 2 iron, 2 sulfur cluster binding 1.87% (2/107) 4.6 0.003029 0.015934
GO:0006811 ion transport 4.67% (5/107) 2.36 0.003004 0.016123
GO:0045275 respiratory chain complex III 0.93% (1/107) 7.85 0.004332 0.018676
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c 0.93% (1/107) 7.85 0.004332 0.018676
GO:0030964 NADH dehydrogenase complex 0.93% (1/107) 7.85 0.004332 0.018676
GO:0005747 mitochondrial respiratory chain complex I 0.93% (1/107) 7.85 0.004332 0.018676
GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor 0.93% (1/107) 7.85 0.004332 0.018676
GO:0008121 ubiquinol-cytochrome-c reductase activity 0.93% (1/107) 7.85 0.004332 0.018676
GO:0008199 ferric iron binding 0.93% (1/107) 7.85 0.004332 0.018676
GO:0005750 mitochondrial respiratory chain complex III 0.93% (1/107) 7.85 0.004332 0.018676
GO:0045271 respiratory chain complex I 0.93% (1/107) 7.85 0.004332 0.018676
GO:0008113 peptide-methionine (S)-S-oxide reductase activity 0.93% (1/107) 7.85 0.004332 0.018676
GO:0016491 oxidoreductase activity 5.61% (6/107) 1.96 0.004588 0.019463
GO:0065008 regulation of biological quality 2.8% (3/107) 3.21 0.004255 0.021944
GO:0098796 membrane protein complex 2.8% (3/107) 3.04 0.005839 0.024374
GO:0004222 metalloendopeptidase activity 1.87% (2/107) 4.1 0.006079 0.024982
GO:1902494 catalytic complex 2.8% (3/107) 3.01 0.006232 0.025215
GO:0009055 electron transfer activity 1.87% (2/107) 4.04 0.006529 0.026016
GO:0016209 antioxidant activity 1.87% (2/107) 3.99 0.006992 0.027044
GO:0006091 generation of precursor metabolites and energy 1.87% (2/107) 3.99 0.006992 0.027044
GO:0009142 nucleoside triphosphate biosynthetic process 1.87% (2/107) 3.85 0.008471 0.030106
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 1.87% (2/107) 3.85 0.008471 0.030106
GO:0009145 purine nucleoside triphosphate biosynthetic process 1.87% (2/107) 3.85 0.008471 0.030106
GO:0006754 ATP biosynthetic process 1.87% (2/107) 3.85 0.008471 0.030106
GO:0009201 ribonucleoside triphosphate biosynthetic process 1.87% (2/107) 3.85 0.008471 0.030106
GO:0070069 cytochrome complex 0.93% (1/107) 6.85 0.008645 0.030314
GO:1901135 carbohydrate derivative metabolic process 2.8% (3/107) 2.87 0.008196 0.03124
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 1.87% (2/107) 3.76 0.009527 0.032124
GO:0009156 ribonucleoside monophosphate biosynthetic process 1.87% (2/107) 3.76 0.009527 0.032124
GO:0009127 purine nucleoside monophosphate biosynthetic process 1.87% (2/107) 3.76 0.009527 0.032124
GO:0005506 iron ion binding 1.87% (2/107) 3.72 0.010076 0.033126
GO:0009124 nucleoside monophosphate biosynthetic process 1.87% (2/107) 3.72 0.010076 0.033126
GO:0009152 purine ribonucleotide biosynthetic process 1.87% (2/107) 3.64 0.011215 0.034702
GO:0046390 ribose phosphate biosynthetic process 1.87% (2/107) 3.64 0.011215 0.034702
GO:0020037 heme binding 1.87% (2/107) 3.64 0.011215 0.034702
GO:0009260 ribonucleotide biosynthetic process 1.87% (2/107) 3.64 0.011215 0.034702
GO:0043167 ion binding 12.15% (13/107) 1.02 0.011494 0.034747
GO:0043169 cation binding 5.61% (6/107) 1.68 0.011482 0.035114
GO:0046872 metal ion binding 5.61% (6/107) 1.69 0.011124 0.03612
GO:0044424 intracellular part 6.54% (7/107) 1.49 0.012508 0.037382
GO:0046906 tetrapyrrole binding 1.87% (2/107) 3.53 0.013025 0.037644
GO:0006164 purine nucleotide biosynthetic process 1.87% (2/107) 3.53 0.013025 0.037644
GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor 0.93% (1/107) 6.27 0.012939 0.038236
GO:0008237 metallopeptidase activity 1.87% (2/107) 3.49 0.013655 0.039035
GO:0072522 purine-containing compound biosynthetic process 1.87% (2/107) 3.42 0.014953 0.042286
GO:0098805 whole membrane 0.93% (1/107) 5.85 0.017215 0.0462
GO:0005741 mitochondrial outer membrane 0.93% (1/107) 5.85 0.017215 0.0462
GO:0031968 organelle outer membrane 0.93% (1/107) 5.85 0.017215 0.0462
GO:0098588 bounding membrane of organelle 0.93% (1/107) 5.85 0.017215 0.0462
GO:0004602 glutathione peroxidase activity 0.93% (1/107) 5.85 0.017215 0.0462
GO:0044464 cell part 6.54% (7/107) 1.38 0.018773 0.049871
GO:0046914 transition metal ion binding 3.74% (4/107) 1.98 0.018974 0.049901
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_12 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_114 0.03 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_22 0.023 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_100 0.032 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_150 0.024 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_23 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_100 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_7 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_135 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_209 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_48 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_71 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_163 0.026 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_148 0.024 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_158 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0085 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_212 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_274 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_174 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_195 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_199 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_2 0.023 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_118 0.03 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_267 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_51 0.023 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_63 0.02 Orthogroups_2024-Update Compare
Sequences (107) (download table)

InterPro Domains

GO Terms

Family Terms