evm.model.tig00021127.5

Description : no hits & (original description: no original description)

Gene families : OG_42_0004126 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004126_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Cyanophora release: evm.model.tig00021127.5
Cluster	HCCA clusters: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g23167	No alias	Function unknown	0.04	Orthogroups_2024-Update
Glyma.07G042100	No alias	Function unknown	0.01	Orthogroups_2024-Update
Glyma.16G010400	No alias	Function unknown	0.03	Orthogroups_2024-Update
Kfl00135_0030	kfl00135_0030_v1.1	(at1g72390 : 90.9) CONTAINS InterPro DOMAIN/s: Spt20...	0.01	Orthogroups_2024-Update
Potri.001G165800	No alias	Function unknown	0.02	Orthogroups_2024-Update
Seita.9G251300.1	No alias	component *(SPT20/ADA5) of SAGA transcription...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	None	Extended
CC	GO:0000124	SAGA complex	IEA	InterProScan predictions
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003712	transcription coregulator activity	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031248	protein acetyltransferase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044451	nucleoplasm part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0070461	SAGA-type complex	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
CC	GO:1902493	acetyltransferase complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1905368	peptidase complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO
MF	GO:0004565	beta-galactosidase activity	IEP	Predicted GO
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005086	ARF guanyl-nucleotide exchange factor activity	IEP	Predicted GO
CC	GO:0005634	nucleus	IEP	Predicted GO
CC	GO:0005643	nuclear pore	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006351	transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
CC	GO:0009341	beta-galactosidase complex	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0009966	regulation of signal transduction	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
BP	GO:0010646	regulation of cell communication	IEP	Predicted GO
MF	GO:0015925	galactosidase activity	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predicted GO
MF	GO:0017056	structural constituent of nuclear pore	IEP	Predicted GO
BP	GO:0023051	regulation of signaling	IEP	Predicted GO
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Predicted GO
BP	GO:0032774	RNA biosynthetic process	IEP	Predicted GO
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
CC	GO:0042765	GPI-anchor transamidase complex	IEP	Predicted GO
CC	GO:0043226	organelle	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043229	intracellular organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Predicted GO
BP	GO:0048583	regulation of response to stimulus	IEP	Predicted GO
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
BP	GO:0097659	nucleic acid-templated transcription	IEP	Predicted GO
MF	GO:0097747	RNA polymerase activity	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR021950	Spt20	275	345
IPR021950	Spt20	202	272

External Links

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evm.model.tig00021127.5

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation