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  5. evm.model.tig00021179.38

evm.model.tig00021179.38


Description : no hits & (original description: no original description)


Gene families : OG_42_0011085 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00021179.38
Cluster HCCA clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Cre07.g350900 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009187 cyclic nucleotide metabolic process IEP Predicted GO
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016849 phosphorus-oxygen lyase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010402 CCT_domain 2194 2235
IPR001646 5peptide_repeat 93 132
IPR020683 Ankyrin_rpt-contain_dom 1181 1291
IPR020683 Ankyrin_rpt-contain_dom 1628 1719
IPR020683 Ankyrin_rpt-contain_dom 750 809
IPR020683 Ankyrin_rpt-contain_dom 821 902
IPR020683 Ankyrin_rpt-contain_dom 1727 1819
IPR020683 Ankyrin_rpt-contain_dom 1085 1174
IPR020683 Ankyrin_rpt-contain_dom 655 745
No external refs found!