Kfl00023_0100 (kfl00023_0100_v1.1)


Aliases : kfl00023_0100_v1.1

Description : (at1g54350 : 360.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter, N-terminal (InterPro:IPR010509), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: peroxisomal ABC transporter 1 (TAIR:AT4G39850.3); Has 196809 Blast hits to 191927 proteins in 3574 species: Archae - 3050; Bacteria - 158969; Metazoa - 4367; Fungi - 3288; Plants - 2549; Viruses - 3; Other Eukaryotes - 24583 (source: NCBI BLink). & (reliability: 720.0) & (original description: no original description)


Gene families : OG_42_0003456 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003456_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00023_0100
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Bradi2g07076 No alias ABC transporter family protein 0.01 Orthogroups_2024-Update
Brara.A01923.1 No alias subfamily ABCD transporter 0.01 Orthogroups_2024-Update
GRMZM2G074103 No alias ABC transporter family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 400 538
IPR011527 ABC1_TM_dom 14 277
No external refs found!