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  5. Kfl00046_0250

Kfl00046_0250 (kfl00046_0250_v1.1)


Aliases : kfl00046_0250_v1.1

Description : (o24534|ef1a_vicfa : 816.0) Elongation factor 1-alpha (EF-1-alpha) - Vicia faba (Broad bean) & (at5g60390 : 811.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1622.0) & (original description: no original description)


Gene families : OG_42_0000485 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00046_0250
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Bradi0012s00100 No alias GTP binding Elongation factor Tu family protein 0.02 Orthogroups_2024-Update
Bradi1g06851 No alias GTP binding Elongation factor Tu family protein 0.02 Orthogroups_2024-Update
Bradi1g06861 No alias GTP binding Elongation factor Tu family protein 0.01 Orthogroups_2024-Update
Bradi1g65725 No alias GTP binding Elongation factor Tu family protein 0.01 Orthogroups_2024-Update
Brara.B01038.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
Brara.B01040.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
Brara.C01040.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
Brara.F00487.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
Brara.I05331.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
Brara.J01398.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
GRMZM2G057535 No alias GTP binding Elongation factor Tu family protein 0.02 Orthogroups_2024-Update
Glyma.16G068000 No alias GTP binding Elongation factor Tu family protein 0.02 Orthogroups_2024-Update
Glyma.17G186600 No alias GTP binding Elongation factor Tu family protein 0.02 Orthogroups_2024-Update
Glyma.19G052400 No alias GTP binding Elongation factor Tu family protein 0.01 Orthogroups_2024-Update
HORVU0Hr1G017020.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
HORVU4Hr1G056740.5 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
HORVU4Hr1G056820.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
HORVU4Hr1G056830.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
HORVU5Hr1G051280.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_434977g0010 No alias (p25698|ef1a_soybn : 756.0) Elongation factor 1-alpha... 0.01 Orthogroups_2024-Update
PSME_00014556-RA No alias (o64937|ef1a_orysa : 851.0) Elongation factor 1-alpha... 0.02 Orthogroups_2024-Update
PSME_00047489-RA No alias (o64937|ef1a_orysa : 854.0) Elongation factor 1-alpha... 0.02 Orthogroups_2024-Update
Potri.010G218800 No alias GTP binding Elongation factor Tu family protein 0.02 Orthogroups_2024-Update
Pp1s7_451V6 No alias elongation factor 1- 0.01 Orthogroups_2024-Update
Pp1s84_186V6 No alias elongation factor 1- 0.02 Orthogroups_2024-Update
Seita.3G265500.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.01 Orthogroups_2024-Update
Seita.3G265700.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.01 Orthogroups_2024-Update
Seita.3G265900.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.01 Orthogroups_2024-Update
Seita.9G442900.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.01 Orthogroups_2024-Update
Seita.9G443000.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.01 Orthogroups_2024-Update
Sobic.010G182100.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.03 Orthogroups_2024-Update
Sobic.010G182200.2 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
Solyc06g005060 No alias elongation factor 1-alpha 0.01 Orthogroups_2024-Update
Solyc06g009970 No alias Elongation factor 1-alpha (AHRD V3.3 *** EF1A_SOLLC) 0.02 Orthogroups_2024-Update
evm.model.tig00021352.57 No alias (o64937|ef1a_orysa : 717.0) Elongation factor 1-alpha... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004399 histidinol dehydrogenase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
MF GO:0004819 glutamine-tRNA ligase activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008705 methionine synthase activity IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
MF GO:0031419 cobalamin binding IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 248 313
IPR000795 TF_GTP-bd_dom 6 223
IPR004160 Transl_elong_EFTu/EF1A_C 321 429
No external refs found!