Coexpression cluster: Cluster_59 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 46.96% (116/247) 0.64 0.0 4e-06
GO:0008150 biological_process 35.22% (87/247) 0.83 0.0 4e-06
GO:0051234 establishment of localization 9.72% (24/247) 1.7 0.0 5.9e-05
GO:0006810 transport 9.72% (24/247) 1.7 0.0 5.9e-05
GO:0051179 localization 9.72% (24/247) 1.68 1e-06 6.3e-05
GO:0005488 binding 28.74% (71/247) 0.7 1.2e-05 0.001092
GO:0005086 ARF guanyl-nucleotide exchange factor activity 1.21% (3/247) 5.39 2.8e-05 0.001313
GO:0032012 regulation of ARF protein signal transduction 1.21% (3/247) 5.39 2.8e-05 0.001313
GO:0046578 regulation of Ras protein signal transduction 1.21% (3/247) 5.39 2.8e-05 0.001313
GO:0051056 regulation of small GTPase mediated signal transduction 1.21% (3/247) 5.39 2.8e-05 0.001313
GO:1902531 regulation of intracellular signal transduction 1.21% (3/247) 5.39 2.8e-05 0.001313
GO:0008152 metabolic process 23.89% (59/247) 0.77 2.2e-05 0.001714
GO:0030127 COPII vesicle coat 1.21% (3/247) 5.13 5.6e-05 0.002398
GO:0055085 transmembrane transport 6.07% (15/247) 1.7 6.4e-05 0.002569
GO:0044281 small molecule metabolic process 5.26% (13/247) 1.85 7.2e-05 0.002663
GO:0003824 catalytic activity 25.1% (62/247) 0.66 0.000105 0.003446
GO:0071704 organic substance metabolic process 18.62% (46/247) 0.81 0.000102 0.003546
GO:0010646 regulation of cell communication 1.21% (3/247) 4.71 0.000153 0.003884
GO:0006888 ER to Golgi vesicle-mediated transport 1.21% (3/247) 4.71 0.000153 0.003884
GO:0005085 guanyl-nucleotide exchange factor activity 1.21% (3/247) 4.71 0.000153 0.003884
GO:0009966 regulation of signal transduction 1.21% (3/247) 4.71 0.000153 0.003884
GO:0023051 regulation of signaling 1.21% (3/247) 4.71 0.000153 0.003884
GO:0051020 GTPase binding 1.62% (4/247) 3.74 0.000201 0.004882
GO:0048583 regulation of response to stimulus 1.21% (3/247) 4.54 0.000227 0.005285
GO:0044425 membrane part 6.88% (17/247) 1.4 0.000277 0.005954
GO:0044238 primary metabolic process 17.41% (43/247) 0.79 0.000268 0.005989
GO:0006811 ion transport 4.05% (10/247) 1.88 0.000416 0.008606
GO:0030120 vesicle coat 1.21% (3/247) 4.25 0.000437 0.008711
GO:0043167 ion binding 15.38% (38/247) 0.8 0.000517 0.009943
GO:0008964 phosphoenolpyruvate carboxylase activity 0.81% (2/247) 5.54 0.000605 0.010882
GO:0030001 metal ion transport 2.02% (5/247) 2.87 0.000594 0.011045
GO:0019899 enzyme binding 1.62% (4/247) 3.22 0.000833 0.014525
GO:0016021 integral component of membrane 5.26% (13/247) 1.43 0.001199 0.014549
GO:0019752 carboxylic acid metabolic process 3.24% (8/247) 2.01 0.000876 0.014816
GO:0006099 tricarboxylic acid cycle 0.81% (2/247) 5.13 0.001198 0.014851
GO:0006101 citrate metabolic process 0.81% (2/247) 5.13 0.001198 0.014851
GO:0004611 phosphoenolpyruvate carboxykinase activity 0.81% (2/247) 5.13 0.001198 0.014851
GO:0015977 carbon fixation 0.81% (2/247) 5.13 0.001198 0.014851
GO:0072350 tricarboxylic acid metabolic process 0.81% (2/247) 5.13 0.001198 0.014851
GO:0016999 antibiotic metabolic process 0.81% (2/247) 5.13 0.001198 0.014851
GO:0044433 cytoplasmic vesicle part 1.21% (3/247) 3.91 0.000934 0.015331
GO:0016020 membrane 6.07% (15/247) 1.34 0.000966 0.015406
GO:0031224 intrinsic component of membrane 5.26% (13/247) 1.41 0.001333 0.015496
GO:0015318 inorganic molecular entity transmembrane transporter activity 3.24% (8/247) 1.91 0.001372 0.015621
GO:0048193 Golgi vesicle transport 1.21% (3/247) 3.71 0.001407 0.015704
GO:0006812 cation transport 2.83% (7/247) 2.09 0.001324 0.015715
GO:0016830 carbon-carbon lyase activity 1.62% (4/247) 3.13 0.001069 0.016119
GO:0006082 organic acid metabolic process 3.24% (8/247) 1.96 0.001102 0.01618
GO:0043436 oxoacid metabolic process 3.24% (8/247) 1.97 0.001053 0.016328
GO:0044237 cellular metabolic process 15.38% (38/247) 0.74 0.001182 0.016919
GO:0015075 ion transmembrane transporter activity 3.24% (8/247) 1.8 0.002236 0.023993
GO:0043169 cation binding 6.48% (16/247) 1.17 0.002225 0.024348
GO:0030117 membrane coat 1.21% (3/247) 3.47 0.002359 0.024837
GO:0005244 voltage-gated ion channel activity 0.81% (2/247) 4.54 0.002938 0.025615
GO:0005247 voltage-gated chloride channel activity 0.81% (2/247) 4.54 0.002938 0.025615
GO:0005253 anion channel activity 0.81% (2/247) 4.54 0.002938 0.025615
GO:0006821 chloride transport 0.81% (2/247) 4.54 0.002938 0.025615
GO:0008308 voltage-gated anion channel activity 0.81% (2/247) 4.54 0.002938 0.025615
GO:0015108 chloride transmembrane transporter activity 0.81% (2/247) 4.54 0.002938 0.025615
GO:0022832 voltage-gated channel activity 0.81% (2/247) 4.54 0.002938 0.025615
GO:0005254 chloride channel activity 0.81% (2/247) 4.54 0.002938 0.025615
GO:0005215 transporter activity 4.86% (12/247) 1.37 0.002571 0.02608
GO:0005975 carbohydrate metabolic process 3.64% (9/247) 1.64 0.002547 0.026319
GO:0098772 molecular function regulator 1.62% (4/247) 2.77 0.002723 0.027129
GO:0005575 cellular_component 13.36% (33/247) 0.7 0.003821 0.032805
GO:0017144 drug metabolic process 2.02% (5/247) 2.26 0.003904 0.033006
GO:0016831 carboxy-lyase activity 1.21% (3/247) 3.19 0.004134 0.034428
GO:0005515 protein binding 9.72% (24/247) 0.83 0.00473 0.037702
GO:0022857 transmembrane transporter activity 4.45% (11/247) 1.33 0.00468 0.037844
GO:2001070 starch binding 0.81% (2/247) 4.13 0.005381 0.038011
GO:0030247 polysaccharide binding 0.81% (2/247) 4.13 0.005381 0.038011
GO:0001871 pattern binding 0.81% (2/247) 4.13 0.005381 0.038011
GO:0045184 establishment of protein localization 2.02% (5/247) 2.17 0.005181 0.03804
GO:0015833 peptide transport 2.02% (5/247) 2.17 0.005181 0.03804
GO:0042886 amide transport 2.02% (5/247) 2.17 0.005181 0.03804
GO:0015031 protein transport 2.02% (5/247) 2.17 0.005181 0.03804
GO:0009987 cellular process 17.0% (42/247) 0.59 0.004675 0.038364
GO:0022890 inorganic cation transmembrane transporter activity 2.02% (5/247) 2.18 0.004905 0.038548
GO:0046872 metal ion binding 6.07% (15/247) 1.09 0.005001 0.038754
GO:0008104 protein localization 2.02% (5/247) 2.13 0.005766 0.039722
GO:0033036 macromolecule localization 2.02% (5/247) 2.13 0.005766 0.039722
GO:0051641 cellular localization 2.02% (5/247) 2.09 0.006396 0.043526
GO:0016887 ATPase activity 2.43% (6/247) 1.83 0.00699 0.04699
GO:0006520 cellular amino acid metabolic process 2.02% (5/247) 2.04 0.00743 0.049356
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_12 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_104 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_106 0.024 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_185 0.022 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_228 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_46 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_57 0.025 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_85 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_110 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_122 0.031 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_19 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_66 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_97 0.021 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_15 0.028 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_32 0.036 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_113 0.022 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_138 0.024 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_59 0.038 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_44 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_47 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_137 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_184 0.039 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_205 0.028 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_225 0.024 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_245 0.024 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_247 0.025 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_258 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_292 0.02 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_48 0.024 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_50 0.022 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_8 0.024 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_30 0.021 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_98 0.026 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_158 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_5 0.036 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_86 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_126 0.025 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_184 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_185 0.028 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_235 0.026 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_94 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_99 0.023 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_112 0.039 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_248 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_255 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_45 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_88 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_106 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_178 0.032 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_189 0.029 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_244 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_252 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_260 0.034 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_323 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_344 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_409 0.03 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_443 0.036 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_497 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_512 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_9 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_55 0.029 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_141 0.027 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_15 0.022 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_95 0.025 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_49 0.024 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_114 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_145 0.021 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_206 0.022 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0004 0.026 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0035 0.02 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0100 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0073 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0085 0.035 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0097 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0161 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_83 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_84 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_94 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_95 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.019 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_168 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_197 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_212 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_286 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_362 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_107 0.029 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_28 0.024 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_48 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_83 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_87 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_94 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_101 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_137 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_192 0.024 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_196 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_251 0.026 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_30 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_58 0.025 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_69 0.026 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_76 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_100 0.037 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_107 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_131 0.024 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_174 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_26 0.023 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_55 0.024 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_74 0.021 Orthogroups_2024-Update Compare
Sequences (247) (download table)

InterPro Domains

GO Terms

Family Terms