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  5. Kfl00433_0040

Kfl00433_0040 (kfl00433_0040_v1.1)


Aliases : kfl00433_0040_v1.1

Description : (at3g59540 : 122.0) Ribosomal L38e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L38e (InterPro:IPR002675); BEST Arabidopsis thaliana protein match is: Ribosomal L38e protein family (TAIR:AT2G43460.1); Has 621 Blast hits to 621 proteins in 253 species: Archae - 3; Bacteria - 0; Metazoa - 265; Fungi - 127; Plants - 120; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description)


Gene families : OG_42_0001927 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00433_0040
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
270247 No alias Ribosomal L38e protein family 0.06 Orthogroups_2024-Update
A4A49_59471 No alias 60s ribosomal protein l38 0.09 Orthogroups_2024-Update
At3g59540 No alias 60S ribosomal protein L38... 0.03 Orthogroups_2024-Update
Bradi1g25302 No alias Ribosomal L38e protein family 0.05 Orthogroups_2024-Update
Bradi3g41837 No alias Ribosomal L38e protein family 0.03 Orthogroups_2024-Update
Brara.C02203.1 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.E00357.1 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.I04090.1 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Cre07.g325746 No alias Ribosomal L38e protein family 0.1 Orthogroups_2024-Update
Glyma.08G100000 No alias Ribosomal L38e protein family 0.06 Orthogroups_2024-Update
Glyma.15G090800 No alias Ribosomal L38e protein family 0.02 Orthogroups_2024-Update
HORVU2Hr1G043220.1 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
MA_20588g0010 No alias (at3g59540 : 129.0) Ribosomal L38e protein family;... 0.08 Orthogroups_2024-Update
Mp7g14520.1 No alias component RPL38 of LSU proteome component 0.03 Orthogroups_2024-Update
PSME_00035421-RA No alias (at3g59540 : 127.0) Ribosomal L38e protein family;... 0.06 Orthogroups_2024-Update
Potri.007G131800 No alias Ribosomal L38e protein family 0.04 Orthogroups_2024-Update
Potri.010G181200 No alias Ribosomal L38e protein family 0.02 Orthogroups_2024-Update
Pp1s227_122V6 No alias 60s ribosomal protein l38 0.1 Orthogroups_2024-Update
Pp1s288_10V6 No alias 60s ribosomal protein l38 0.08 Orthogroups_2024-Update
Pp1s46_212V6 No alias 60s ribosomal protein l38 0.02 Orthogroups_2024-Update
Pp1s67_172V6 No alias 60s ribosomal protein l38 0.06 Orthogroups_2024-Update
Seita.2G274700.1 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Seita.2G333600.1 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Seita.2G344700.1 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Seita.6G231700.1 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Sobic.002G331300.1 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Sobic.007G184600.2 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Solyc05g055640 No alias ARM repeat superfamily protein (AHRD V3.3 --* AT1G12930.1) 0.04 Orthogroups_2024-Update
Solyc11g008510 No alias 60S ribosomal protein L38 (AHRD V3.3 *** RL38_SOLLC) 0.05 Orthogroups_2024-Update
Sopen05g034080 No alias Ribosomal L38e protein family 0.06 Orthogroups_2024-Update
Sopen11g004300 No alias Ribosomal L38e protein family 0.06 Orthogroups_2024-Update
evm.model.tig00021719.6 No alias (at3g59540 : 110.0) Ribosomal L38e protein family;... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002675 Ribosomal_L38e 2 69
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