Kfl00989_0050 (kfl00989_0050_v1.1)

Aliases : kfl00989_0050_v1.1

Description : (q96499|rl44_goshi : 200.0) 60S ribosomal protein L44 - Gossypium hirsutum (Upland cotton) & (at4g14320 : 195.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L44e (InterPro:IPR000552), Ribosomal protein, zinc-binding domain (InterPro:IPR011332); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT3G23390.1). & (reliability: 390.0) & (original description: no original description)

Gene families : OG_42_0001870 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001870_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Klebsormidium release: Kfl00989_0050
Cluster	HCCA clusters: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
161986	No alias	Zinc-binding ribosomal protein family protein	0.04	Orthogroups_2024-Update
A4A49_42104	No alias	60s ribosomal protein l44	0.05	Orthogroups_2024-Update
A4A49_63762	No alias	60s ribosomal protein l44	0.03	Orthogroups_2024-Update
At3g23390	No alias	60S ribosomal protein L36a...	0.01	Orthogroups_2024-Update
Brara.A02648.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Brara.C03915.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Brara.D00648.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.02	Orthogroups_2024-Update
Brara.G00538.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Brara.H01878.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Cre06.g310700	No alias	Zinc-binding ribosomal protein family protein	0.04	Orthogroups_2024-Update
GRMZM2G009412	No alias	Zinc-binding ribosomal protein family protein	0.01	Orthogroups_2024-Update
Glyma.05G120700	No alias	Zinc-binding ribosomal protein family protein	0.02	Orthogroups_2024-Update
Glyma.08G075500	No alias	Zinc-binding ribosomal protein family protein	0.02	Orthogroups_2024-Update
Glyma.08G181300	No alias	Zinc-binding ribosomal protein family protein	0.02	Orthogroups_2024-Update
Glyma.15G051000	No alias	Zinc-binding ribosomal protein family protein	0.03	Orthogroups_2024-Update
HORVU5Hr1G081590.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
HORVU5Hr1G101600.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
HORVU7Hr1G104300.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.02	Orthogroups_2024-Update
MA_99845g0010	No alias	(at4g14320 : 160.0) Zinc-binding ribosomal protein...	0.06	Orthogroups_2024-Update
PSME_00003754-RA	No alias	(at4g14320 : 164.0) Zinc-binding ribosomal protein...	0.03	Orthogroups_2024-Update
Potri.010G251500	No alias	Zinc-binding ribosomal protein family protein	0.02	Orthogroups_2024-Update
Pp1s115_63V6	No alias	60s ribosomal protein l44	0.05	Orthogroups_2024-Update
Pp1s22_326V6	No alias	60s ribosomal protein l44	0.04	Orthogroups_2024-Update
Pp1s2_415V6	No alias	60s ribosomal protein l44	0.04	Orthogroups_2024-Update
Pp1s6_198V6	No alias	60s ribosomal protein l44	0.04	Orthogroups_2024-Update
Pp1s74_73V6	No alias	60s ribosomal protein l44	0.05	Orthogroups_2024-Update
Seita.2G122900.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.02	Orthogroups_2024-Update
Seita.9G438600.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Sobic.001G018800.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Sobic.002G175100.1	No alias	component *(eL42) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Solyc03g112850	No alias	60S ribosomal protein L44 (AHRD V3.3 *** RL44_GOSHI)	0.04	Orthogroups_2024-Update
Solyc06g071530	No alias	60S ribosomal protein L44 (AHRD V3.3 *** RL44_GOSHI)	0.04	Orthogroups_2024-Update
Sopen03g031930	No alias	Ribosomal protein L44	0.04	Orthogroups_2024-Update
Sopen06g027820	No alias	Ribosomal protein L44	0.05	Orthogroups_2024-Update
evm.model.contig_2517.1	No alias	(at4g14320 : 166.0) Zinc-binding ribosomal protein...	0.06	Orthogroups_2024-Update
evm.model.tig00000489.11	No alias	(q96499\|rl44_goshi : 166.0) 60S ribosomal protein L44 -...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Predicted GO
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Predicted GO
CC	GO:0005737	cytoplasm	IEP	Predicted GO
CC	GO:0005743	mitochondrial inner membrane	IEP	Predicted GO
CC	GO:0005787	signal peptidase complex	IEP	Predicted GO
BP	GO:0006465	signal peptide processing	IEP	Predicted GO
BP	GO:0006534	cysteine metabolic process	IEP	Predicted GO
BP	GO:0006535	cysteine biosynthetic process from serine	IEP	Predicted GO
BP	GO:0006563	L-serine metabolic process	IEP	Predicted GO
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	IEP	Predicted GO
MF	GO:0009001	serine O-acetyltransferase activity	IEP	Predicted GO
BP	GO:0009069	serine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009611	response to wounding	IEP	Predicted GO
MF	GO:0016412	serine O-acyltransferase activity	IEP	Predicted GO
MF	GO:0016413	O-acetyltransferase activity	IEP	Predicted GO
BP	GO:0016485	protein processing	IEP	Predicted GO
BP	GO:0019344	cysteine biosynthetic process	IEP	Predicted GO
CC	GO:0019866	organelle inner membrane	IEP	Predicted GO
MF	GO:0030414	peptidase inhibitor activity	IEP	Predicted GO
MF	GO:0033925	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	IEP	Predicted GO
MF	GO:0061134	peptidase regulator activity	IEP	Predicted GO
MF	GO:0061135	endopeptidase regulator activity	IEP	Predicted GO
CC	GO:0070469	respiratory chain	IEP	Predicted GO
CC	GO:1905368	peptidase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000552	Ribosomal_L44e	19	93

External Links

No external refs found!

Kfl00989_0050 (kfl00989_0050_v1.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation