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  5. Solyc01g079620

Solyc01g079620


Description : colorless fruit epidermis


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g079620
Cluster HCCA clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
A4A49_06981 No alias transcription factor gamyb 0.03 Orthogroups_2024-Update
At1g08810 No alias MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25] 0.05 Orthogroups_2024-Update
At5g15310 No alias MYB16 [Source:UniProtKB/TrEMBL;Acc:A0A178UJ10] 0.05 Orthogroups_2024-Update
Bradi2g46770 No alias myb domain protein 87 0.02 Orthogroups_2024-Update
Brara.A03255.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Brara.B01071.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.C03158.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Brara.G01033.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Brara.I04780.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G001223 No alias myb domain protein 106 0.03 Orthogroups_2024-Update
GRMZM2G041415 No alias myb domain protein 4 0.05 Orthogroups_2024-Update
GRMZM2G431156 No alias myb domain protein 6 0.04 Orthogroups_2024-Update
Glyma.13G061900 No alias myb domain protein 16 0.02 Orthogroups_2024-Update
HORVU1Hr1G045090.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g18240 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g74410 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g46560 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g37690 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Mp1g09420.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
Potri.005G001600 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
Potri.005G224100 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Solyc06g053610 No alias R2R3MYB transcription factor 14 0.03 Orthogroups_2024-Update
Solyc06g065100 No alias R2R3MYB transcription factor 3 0.03 Orthogroups_2024-Update
Solyc11g073120 No alias R2R3MYB transcription factor 58 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!