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  5. LOC_Os01g63420

LOC_Os01g63420


Description : OsFBL4 - F-box domain and LRR containing protein, expressed


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os01g63420
Cluster HCCA clusters: cluster_0058

Target Alias Description ECC score Gene Family Method Actions
At2g39940 No alias Coronatine-insensitive protein 1... 0.03 Orthogroups_2024-Update
At3g26810 No alias AFB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VGF7] 0.03 Orthogroups_2024-Update
GRMZM5G848945 No alias auxin signaling F-box 3 0.05 Orthogroups_2024-Update
HORVU4Hr1G060950.3 No alias component *(COI) of jasmonic acid receptor complex 0.03 Orthogroups_2024-Update
Mp6g02750.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.01 Orthogroups_2024-Update
PSME_00005246-RA No alias (at3g62980 : 633.0) Encodes an auxin receptor that... 0.02 Orthogroups_2024-Update
PSME_00027400-RA No alias (at2g39940 : 611.0) Encodes a protein containing... 0.03 Orthogroups_2024-Update
Pp1s3_119V6 No alias xfb2 gene for F-box protein XFB2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!