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  5. LOC_Os02g27760

LOC_Os02g27760


Description : 40S ribosomal protein S15a, putative, expressed


Gene families : OG_42_0001161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001161_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g27760
Cluster HCCA clusters: cluster_0085

Target Alias Description ECC score Gene Family Method Actions
228163 No alias Ribosomal protein S8 family protein 0.02 Orthogroups_2024-Update
Bradi2g23110 No alias ribosomal protein S15A 0.04 Orthogroups_2024-Update
Bradi2g54450 No alias ribosomal protein S15A 0.04 Orthogroups_2024-Update
Brara.C01067.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.F00468.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Cre05.g234637 No alias Ribosomal protein S8 family protein 0.03 Orthogroups_2024-Update
Glyma.01G240000 No alias ribosomal protein S15A 0.02 Orthogroups_2024-Update
Glyma.07G255500 No alias ribosomal protein S15A 0.02 Orthogroups_2024-Update
Glyma.11G003600 No alias ribosomal protein S15A 0.03 Orthogroups_2024-Update
Glyma.11G003700 No alias ribosomal protein S15A 0.03 Orthogroups_2024-Update
Glyma.15G102550 No alias ribosomal protein S15A 0.02 Orthogroups_2024-Update
Glyma.17G018600 No alias ribosomal protein S15A 0.03 Orthogroups_2024-Update
HORVU3Hr1G086930.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Kfl00864_0040 kfl00864_0040_v1.1 (at5g59850 : 230.0) Ribosomal protein S8 family protein;... 0.02 Orthogroups_2024-Update
MA_57835g0010 No alias (at3g46040 : 223.0) Regulated by TCP20.; ribosomal... 0.04 Orthogroups_2024-Update
MA_82191g0010 No alias (at3g46040 : 223.0) Regulated by TCP20.; ribosomal... 0.02 Orthogroups_2024-Update
Mp8g13010.1 No alias component RPS15a of SSU proteome 0.04 Orthogroups_2024-Update
PSME_00001830-RA No alias (at5g59850 : 244.0) Ribosomal protein S8 family protein;... 0.02 Orthogroups_2024-Update
PSME_00015526-RA No alias (at5g59850 : 244.0) Ribosomal protein S8 family protein;... 0.04 Orthogroups_2024-Update
Potri.001G118100 No alias ribosomal protein S15A 0.03 Orthogroups_2024-Update
Potri.010G208700 No alias Ribosomal protein S8 family protein 0.03 Orthogroups_2024-Update
Pp1s115_101V6 No alias 40s ribosomal protein s15a 0.02 Orthogroups_2024-Update
Pp1s1_304V6 No alias 40s ribosomal protein s15a 0.02 Orthogroups_2024-Update
Pp1s426_18V6 No alias 40s ribosomal protein s15a 0.02 Orthogroups_2024-Update
Pp1s45_88V6 No alias 40s ribosomal protein s15a 0.03 Orthogroups_2024-Update
Pp1s61_209V6 No alias 40s ribosomal protein s15a 0.02 Orthogroups_2024-Update
Seita.2G319400.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Seita.5G374600.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.003G012700.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Sopen04g025860 No alias Ribosomal protein S8 0.02 Orthogroups_2024-Update
Sopen04g026020 No alias Ribosomal protein S8 0.03 Orthogroups_2024-Update
evm.model.contig_2045.5 No alias (at5g59850 : 190.0) Ribosomal protein S8 family protein;... 0.04 Orthogroups_2024-Update
evm.model.tig00000158.110 No alias (q9at34|rs15a_dauca : 210.0) 40S ribosomal protein S15a... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030677 ribonuclease P complex IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0045048 protein insertion into ER membrane IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1902555 endoribonuclease complex IEP Predicted GO
CC GO:1905348 endonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 7 130
No external refs found!