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  5. LOC_Os02g37300

LOC_Os02g37300


Description : heavy metal associated domain containing protein, expressed


Gene families : OG_42_0000681 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g37300
Cluster HCCA clusters: cluster_0112

Target Alias Description ECC score Gene Family Method Actions
Bradi3g47220 No alias Copper transport protein family 0.02 Orthogroups_2024-Update
Brara.E03518.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F03021.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G160710 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G169726 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
GRMZM5G882364 No alias Copper transport protein family 0.03 Orthogroups_2024-Update
Glyma.09G016400 No alias Copper transport protein family 0.02 Orthogroups_2024-Update
Potri.001G378700 No alias Copper transport protein family 0.03 Orthogroups_2024-Update
Potri.014G171300 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G211700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.7G130900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G131500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.7G131600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G195800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G113200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G113400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G113800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G113900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G114200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc07g056200 No alias Heavy metal transport/detoxification superfamily... 0.03 Orthogroups_2024-Update
Sopen07g029540 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 8 65
No external refs found!