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  5. LOC_Os02g45390

LOC_Os02g45390


Description : RING-H2 finger protein, putative, expressed


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os02g45390
Cluster HCCA clusters: cluster_0062

Target Alias Description ECC score Gene Family Method Actions
Brara.E00282.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.E02318.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Glyma.03G203400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G015200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G289100 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os02g15060 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.005G160900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G025300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Pp1s100_96V6 No alias No description available 0.01 Orthogroups_2024-Update
Pp1s460_19V6 No alias zinc finger 0.01 Orthogroups_2024-Update
Seita.1G197500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.1G197600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G109600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sopen06g022560 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen11g001300 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 108 151
No external refs found!