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  5. LOC_Os03g03480

LOC_Os03g03480


Description : DUF623 domain containing protein, expressed


Gene families : OG_42_0000150 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g03480
Cluster HCCA clusters: cluster_0145

Target Alias Description ECC score Gene Family Method Actions
Brara.F02494.1 No alias transcriptional co-regulator *(OFP) 0.03 Orthogroups_2024-Update
Brara.G00173.1 No alias transcriptional co-regulator *(OFP) 0.02 Orthogroups_2024-Update
Brara.J01221.1 No alias transcriptional co-regulator *(OFP) 0.02 Orthogroups_2024-Update
GRMZM2G039312 No alias Ovate family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G076490.1 No alias transcriptional co-regulator *(OFP) 0.03 Orthogroups_2024-Update
HORVU3Hr1G055980.1 No alias transcriptional co-regulator *(OFP) 0.02 Orthogroups_2024-Update
LOC_Os05g44090 No alias DUF623 domain containing protein, expressed 0.03 Orthogroups_2024-Update
Pp1s34_338V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.5G391700.1 No alias transcriptional co-regulator *(OFP) 0.02 Orthogroups_2024-Update
Sobic.001G523500.1 No alias transcriptional co-regulator *(OFP) & lysine-rich... 0.02 Orthogroups_2024-Update
Solyc07g055240 No alias No description available 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
InterPro domains Description Start Stop
IPR006458 Ovate_C 153 210
No external refs found!