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  5. LOC_Os03g19270

LOC_Os03g19270


Description : universal stress protein domain containing protein, putative, expressed


Gene families : OG_42_0000093 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g19270
Cluster HCCA clusters: cluster_0076

Target Alias Description ECC score Gene Family Method Actions
Brara.C02372.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU1Hr1G025470.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g52314 No alias BTB1 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain, expressed 0.05 Orthogroups_2024-Update
LOC_Os05g37970 No alias universal stress protein domain containing protein,... 0.03 Orthogroups_2024-Update
LOC_Os12g36630 No alias universal stress protein domain containing protein,... 0.02 Orthogroups_2024-Update
MA_10250029g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_179316g0010 No alias (at3g17020 : 153.0) Adenine nucleotide alpha... 0.02 Orthogroups_2024-Update
MA_34981g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.010G123400 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G064000 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.9G243700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g057000 No alias Universal stress protein 0.04 Orthogroups_2024-Update
Sopen04g006740 No alias Universal stress protein family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006016 UspA 14 191
No external refs found!