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  5. LOC_Os03g43860

LOC_Os03g43860


Description : SNF7 domain containing protein, putative, expressed


Gene families : OG_42_0001019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001019_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g43860
Cluster HCCA clusters: cluster_0133

Target Alias Description ECC score Gene Family Method Actions
Sopen06g003140 No alias Snf7 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005024 Snf7_fam 18 185
No external refs found!