1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g054770

Solyc07g054770


Description : Wound-responsive family protein (AHRD V3.3 *** A0A061E3U8_THECC)


Gene families : OG_42_0000562 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000562_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g054770
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Brara.K01532.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.12G200500 No alias Wound-responsive family protein 0.05 Orthogroups_2024-Update
Glyma.13G301500 No alias Wound-responsive family protein 0.06 Orthogroups_2024-Update
Potri.011G126000 No alias Wound-responsive family protein 0.03 Orthogroups_2024-Update
Potri.019G117500 No alias Wound-responsive family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP Predicted GO
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022251 DUF3774_wound-induced 11 88
No external refs found!