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  5. LOC_Os04g46680

LOC_Os04g46680


Description : ZOS4-10 - C2H2 zinc finger protein, expressed


Gene families : OG_42_0002330 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g46680
Cluster HCCA clusters: cluster_0110

Target Alias Description ECC score Gene Family Method Actions
At4g16610 No alias C2H2-like zinc finger protein... 0.03 Orthogroups_2024-Update
Brara.A01877.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Brara.I04180.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G097410.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G063280.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Potri.003G077200 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!