1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g006820

Solyc08g006820


Description : Transmembrane 9 superfamily member (AHRD V3.3 *** M1CHH8_SOLTU)


Gene families : OG_42_0000405 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000405_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g006820
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
165859 No alias transmembrane nine 7 0.03 Orthogroups_2024-Update
Bradi1g37590 No alias transmembrane nine 7 0.05 Orthogroups_2024-Update
Bradi3g19620 No alias Endomembrane protein 70 protein family 0.04 Orthogroups_2024-Update
Brara.C00443.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.D00756.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.I04498.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Cre10.g439850 No alias transmembrane nine 7 0.02 Orthogroups_2024-Update
Cre12.g494350 No alias Endomembrane protein 70 protein family 0.01 Orthogroups_2024-Update
Glyma.17G104400 No alias Endomembrane protein 70 protein family 0.03 Orthogroups_2024-Update
Glyma.17G223200 No alias Endomembrane protein 70 protein family 0.04 Orthogroups_2024-Update
Kfl00519_0100 kfl00519_0100_v1.1 (at3g13772 : 894.0) Encodes an Arabidopsis Transmembrane... 0.02 Orthogroups_2024-Update
LOC_Os09g38530 No alias transmembrane 9 superfamily member, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G217300 No alias Endomembrane protein 70 protein family 0.03 Orthogroups_2024-Update
Pp1s137_209V6 No alias endosomal p24a protein 0.05 Orthogroups_2024-Update
Pp1s24_182V6 No alias endosomal p24a protein 0.03 Orthogroups_2024-Update
Pp1s6_147V6 No alias endosomal p24a protein 0.02 Orthogroups_2024-Update
Pp1s6_152V6 No alias endosomal p24a protein 0.02 Orthogroups_2024-Update
Pp1s73_94V6 No alias MMM17.22; endomembrane protein 70, putative [Arabidopsis... 0.03 Orthogroups_2024-Update
Pp1s83_105V6 No alias endosomal p24a protein 0.04 Orthogroups_2024-Update
Seita.1G352400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G196200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G235900.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.6G246900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G111300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G172400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen03g040380 No alias Endomembrane protein 70 0.03 Orthogroups_2024-Update
Sopen07g003100 No alias Endomembrane protein 70 0.05 Orthogroups_2024-Update
Sopen08g002770 No alias Endomembrane protein 70 0.03 Orthogroups_2024-Update
Sopen12g005400 No alias Endomembrane protein 70 0.03 Orthogroups_2024-Update
evm.model.contig_444.14 No alias (at3g13772 : 464.0) Encodes an Arabidopsis Transmembrane... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004860 protein kinase inhibitor activity IEP Predicted GO
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007050 cell cycle arrest IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019210 kinase inhibitor activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004240 EMP70 60 607
No external refs found!