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  5. LOC_Os05g48900

LOC_Os05g48900


Description : fasciclin domain containing protein, expressed


Gene families : OG_42_0000509 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g48900
Cluster HCCA clusters: cluster_0061

Target Alias Description ECC score Gene Family Method Actions
A4A49_30158 No alias fasciclin-like arabinogalactan protein 9 0.03 Orthogroups_2024-Update
Glyma.03G180000 No alias FASCICLIN-like arabinogalactan-protein 11 0.02 Orthogroups_2024-Update
Glyma.05G162000 No alias FASCICLIN-like arabinogalactan-protein 11 0.02 Orthogroups_2024-Update
Glyma.08G119500 No alias FASCICLIN-like arabinogalactan-protein 12 0.02 Orthogroups_2024-Update
HORVU1Hr1G087570.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G018810.2 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
LOC_Os01g47780 No alias fasciclin domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_5195g0010 No alias (at5g60490 : 91.7) FASCICLIN-like... 0.03 Orthogroups_2024-Update
Potri.009G012200 No alias FASCICLIN-like arabinogalactan-protein 12 0.02 Orthogroups_2024-Update
Sobic.002G351000.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 62 192
No external refs found!