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Description : ZOS5-12 - C2H2 zinc finger protein, expressed
Gene families : OG_42_0001839 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001839_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os05g51830 | |
| Cluster | HCCA clusters: cluster_0005 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At2g27840 | No alias | Histone deacetylase HDT4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M4T3] | 0.04 | Orthogroups_2024-Update | |
| At3g44750 | No alias | Histone deacetylase HDT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVE6] | 0.03 | Orthogroups_2024-Update | |
| At5g22650 | No alias | Histone deacetylase HDT2 [Source:UniProtKB/Swiss-Prot;Acc:Q56WH4] | 0.03 | Orthogroups_2024-Update | |
| Bradi2g14120 | No alias | histone deacetylase 2B | 0.03 | Orthogroups_2024-Update | |
| Brara.B00987.1 | No alias | HD2-type histone deacetylase *(HD2/HDT) | 0.02 | Orthogroups_2024-Update | |
| Brara.C01007.1 | No alias | HD2-type histone deacetylase *(HD2/HDT) | 0.04 | Orthogroups_2024-Update | |
| Brara.D01665.1 | No alias | HD2-type histone deacetylase *(HD2/HDT) | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G100146 | No alias | histone deacetylase 3 | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G189500 | No alias | histone deacetylase 2B | 0.03 | Orthogroups_2024-Update | |
| Glyma.12G084700 | No alias | histone deacetylase 2C | 0.04 | Orthogroups_2024-Update | |
| Glyma.12G181400 | No alias | histone deacetylase 2C | 0.04 | Orthogroups_2024-Update | |
| Kfl00300_0030 | kfl00300_0030_v1.1 | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update | |
| MA_601245g0010 | No alias | (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
| Potri.004G188800 | No alias | histone deacetylase 2C | 0.03 | Orthogroups_2024-Update | |
| Potri.009G149400 | No alias | histone deacetylase 3 | 0.04 | Orthogroups_2024-Update | |
| Pp1s7_389V6 | No alias | histone deacetylase | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G396600.1 | No alias | HD2-type histone deacetylase *(HD2/HDT) | 0.03 | Orthogroups_2024-Update | |
| Solyc09g009030 | No alias | Histone deacetylase HDT1 (AHRD V3.3 *** HDT1_SOLCH) | 0.03 | Orthogroups_2024-Update | |
| evm.model.tig00000388.65 | No alias | (at4g25340 : 88.6) Encodes a member of the FKBP-type... | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00000983.33 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
| MF | GO:0005542 | folic acid binding | IEP | Predicted GO |
| BP | GO:0006414 | translational elongation | IEP | Predicted GO |
| BP | GO:0006448 | regulation of translational elongation | IEP | Predicted GO |
| BP | GO:0006449 | regulation of translational termination | IEP | Predicted GO |
| BP | GO:0006452 | translational frameshifting | IEP | Predicted GO |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006772 | thiamine metabolic process | IEP | Predicted GO |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008536 | Ran GTPase binding | IEP | Predicted GO |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Predicted GO |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Predicted GO |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Predicted GO |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
| MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
| MF | GO:0019207 | kinase regulator activity | IEP | Predicted GO |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0019887 | protein kinase regulator activity | IEP | Predicted GO |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Predicted GO |
| MF | GO:0031406 | carboxylic acid binding | IEP | Predicted GO |
| BP | GO:0032270 | positive regulation of cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
| MF | GO:0033218 | amide binding | IEP | Predicted GO |
| BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Predicted GO |
| MF | GO:0043022 | ribosome binding | IEP | Predicted GO |
| MF | GO:0043177 | organic acid binding | IEP | Predicted GO |
| BP | GO:0043243 | positive regulation of protein complex disassembly | IEP | Predicted GO |
| BP | GO:0043244 | regulation of protein complex disassembly | IEP | Predicted GO |
| MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
| BP | GO:0045727 | positive regulation of translation | IEP | Predicted GO |
| BP | GO:0045901 | positive regulation of translational elongation | IEP | Predicted GO |
| BP | GO:0045905 | positive regulation of translational termination | IEP | Predicted GO |
| BP | GO:0048518 | positive regulation of biological process | IEP | Predicted GO |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Predicted GO |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | Predicted GO |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Predicted GO |
| MF | GO:0072341 | modified amino acid binding | IEP | Predicted GO |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |