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  5. Solyc08g015960

Solyc08g015960


Description : Methionyl-tRNA synthetase, putative (AHRD V3.3 *** B9STA0_RICCO)


Gene families : OG_42_0002556 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002556_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc08g015960
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre01.g046652 No alias Nucleic acid-binding, OB-fold-like protein 0.03 Orthogroups_2024-Update
GRMZM2G021170 No alias Nucleic acid-binding, OB-fold-like protein 0.03 Orthogroups_2024-Update
Glyma.12G009400 No alias Nucleic acid-binding, OB-fold-like protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G066320.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00003_0540 kfl00003_0540_v1.1 (at3g59980 : 177.0) Nucleic acid-binding, OB-fold-like... 0.02 Orthogroups_2024-Update
Kfl00263_0190 kfl00263_0190_v1.1 (at2g40660 : 202.0) Nucleic acid-binding, OB-fold-like... 0.01 Orthogroups_2024-Update
Pp1s129_152V6 No alias F24G16.250; tRNA-binding region domain-containing... 0.02 Orthogroups_2024-Update
Sobic.001G010800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen08g006220 No alias Putative tRNA binding domain 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004019 adenylosuccinate synthase activity IEP Predicted GO
MF GO:0004733 pyridoxamine-phosphate oxidase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
CC GO:0009349 riboflavin synthase complex IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002547 tRNA-bd_dom 125 219
No external refs found!