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  5. LOC_Os06g22070

LOC_Os06g22070


Description : mitochondrial glycoprotein, putative, expressed


Gene families : OG_42_0001442 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g22070
Cluster HCCA clusters: cluster_0059

Target Alias Description ECC score Gene Family Method Actions
At2g39795 No alias Uncharacterized protein At2g39795, mitochondrial... 0.02 Orthogroups_2024-Update
At5g02050 No alias At5g02050 [Source:UniProtKB/TrEMBL;Acc:Q9LZM6] 0.03 Orthogroups_2024-Update
At5g05990 No alias AT5g05990/K18J17_19 [Source:UniProtKB/TrEMBL;Acc:Q9FI87] 0.02 Orthogroups_2024-Update
Bradi2g02870 No alias Mitochondrial glycoprotein family protein 0.03 Orthogroups_2024-Update
Brara.C00053.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.E00600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G011213 No alias Mitochondrial glycoprotein family protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G046980.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Mp1g21440.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Potri.006G090700 No alias Mitochondrial glycoprotein family protein 0.05 Orthogroups_2024-Update
Potri.010G198600 No alias Mitochondrial glycoprotein family protein 0.04 Orthogroups_2024-Update
Pp1s118_113V6 No alias contains ESTs AU108164(C53469),C27934(C53469) similar to... 0.02 Orthogroups_2024-Update
Seita.4G141500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G099100.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.003G075200.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.010G134100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen03g027200 No alias Mitochondrial glycoprotein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
CC GO:0000176 nuclear exosome (RNase complex) IEP Predicted GO
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034311 diol metabolic process IEP Predicted GO
BP GO:0034312 diol biosynthetic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003428 MAM33 88 267
No external refs found!