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LOC_Os07g12170


Description : ADP-ribosylation factor, putative, expressed


Gene families : OG_42_0000220 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g12170
Cluster HCCA clusters: cluster_0052

Target Alias Description ECC score Gene Family Method Actions
Brara.G02969.1 No alias ARF-GTPase *(ARF1) 0.02 Orthogroups_2024-Update
GRMZM2G395844 No alias ADP-ribosylation factor A1B 0.02 Orthogroups_2024-Update
Glyma.19G219200 No alias ADP-ribosylation factor A1F 0.02 Orthogroups_2024-Update
Kfl00010_0490 kfl00010_0490_v1.1 (at2g24765 : 318.0) GTPase required for Golgi targeting... 0.01 Orthogroups_2024-Update
PSME_00027856-RA No alias (p49076|arf_maize : 218.0) ADP-ribosylation factor - Zea... 0.03 Orthogroups_2024-Update
Potri.005G007400 No alias ADP-ribosylation factor A1F 0.02 Orthogroups_2024-Update
Potri.013G005500 No alias ADP-ribosylation factor A1F 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0009555 pollen development IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0048229 gametophyte development IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 130 300
No external refs found!