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Description : pentatricopeptide, putative, expressed
Gene families : OG_42_0007791 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007791_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os08g37520 | |
| Cluster | HCCA clusters: cluster_0076 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi3g38620 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | Predicted GO |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Predicted GO |
| MF | GO:0004497 | monooxygenase activity | IEP | Predicted GO |
| MF | GO:0004499 | N,N-dimethylaniline monooxygenase activity | IEP | Predicted GO |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Predicted GO |
| MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Predicted GO |
| MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | Predicted GO |
| BP | GO:0005985 | sucrose metabolic process | IEP | Predicted GO |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | Predicted GO |
| MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
| BP | GO:0015711 | organic anion transport | IEP | Predicted GO |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | Predicted GO |
| BP | GO:0015743 | malate transport | IEP | Predicted GO |
| BP | GO:0015849 | organic acid transport | IEP | Predicted GO |
| MF | GO:0016157 | sucrose synthase activity | IEP | Predicted GO |
| CC | GO:0016592 | mediator complex | IEP | Predicted GO |
| MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Predicted GO |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Predicted GO |
| MF | GO:0030234 | enzyme regulator activity | IEP | Predicted GO |
| MF | GO:0030695 | GTPase regulator activity | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0046942 | carboxylic acid transport | IEP | Predicted GO |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Predicted GO |
| MF | GO:0098772 | molecular function regulator | IEP | Predicted GO |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 23 | 45 |
| IPR002885 | Pentatricopeptide_repeat | 173 | 203 |
| IPR002885 | Pentatricopeptide_repeat | 475 | 503 |
| IPR002885 | Pentatricopeptide_repeat | 306 | 333 |
| IPR002885 | Pentatricopeptide_repeat | 409 | 434 |
| IPR002885 | Pentatricopeptide_repeat | 80 | 108 |
| IPR002885 | Pentatricopeptide_repeat | 48 | 79 |
| IPR002885 | Pentatricopeptide_repeat | 139 | 167 |
| IPR002885 | Pentatricopeptide_repeat | 334 | 380 |
| IPR002885 | Pentatricopeptide_repeat | 232 | 280 |
| No external refs found! |