Description : RING-H2 finger protein, putative, expressed
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os10g39450 | |
Cluster | HCCA clusters: cluster_0085 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
74486 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
A4A49_09451 | No alias | ring-h2 finger protein atl72 | 0.03 | Orthogroups_2024-Update | |
At1g20823 | No alias | RING-H2 finger protein ATL80... | 0.02 | Orthogroups_2024-Update | |
At2g37580 | No alias | RING-H2 finger protein ATL33... | 0.02 | Orthogroups_2024-Update | |
Glyma.02G264800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.05G188900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G121570.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
LOC_Os02g52210 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
MA_904294g0010 | No alias | (at1g72310 : 107.0) Encodes a putative RING-H2 zinc... | 0.02 | Orthogroups_2024-Update | |
Seita.5G023000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.001G308100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.004G348500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Solyc01g066430 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G47560.1) | 0.02 | Orthogroups_2024-Update | |
Solyc02g082420 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT1G20823.1) | 0.02 | Orthogroups_2024-Update | |
Solyc06g064440 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 *-*... | 0.02 | Orthogroups_2024-Update | |
Solyc10g011880 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT3G61550.1) | 0.03 | Orthogroups_2024-Update | |
Sopen02g016820 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
Sopen03g041450 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
Sopen11g005110 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
Sopen12g029870 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006771 | riboflavin metabolic process | IEP | Predicted GO |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predicted GO |
CC | GO:0009349 | riboflavin synthase complex | IEP | Predicted GO |
BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
BP | GO:0010038 | response to metal ion | IEP | Predicted GO |
CC | GO:0016272 | prefoldin complex | IEP | Predicted GO |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0051499 | D-aminoacyl-tRNA deacylase activity | IEP | Predicted GO |
MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predicted GO |
MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 157 | 200 |
No external refs found! |