1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os10g39450

LOC_Os10g39450


Description : RING-H2 finger protein, putative, expressed


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g39450
Cluster HCCA clusters: cluster_0085

Target Alias Description ECC score Gene Family Method Actions
74486 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
A4A49_09451 No alias ring-h2 finger protein atl72 0.03 Orthogroups_2024-Update
At1g20823 No alias RING-H2 finger protein ATL80... 0.02 Orthogroups_2024-Update
At2g37580 No alias RING-H2 finger protein ATL33... 0.02 Orthogroups_2024-Update
Glyma.02G264800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G188900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G121570.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os02g52210 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_904294g0010 No alias (at1g72310 : 107.0) Encodes a putative RING-H2 zinc... 0.02 Orthogroups_2024-Update
Seita.5G023000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G308100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G348500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc01g066430 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G47560.1) 0.02 Orthogroups_2024-Update
Solyc02g082420 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G20823.1) 0.02 Orthogroups_2024-Update
Solyc06g064440 No alias RING/U-box superfamily protein, putative (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc10g011880 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G61550.1) 0.03 Orthogroups_2024-Update
Sopen02g016820 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen03g041450 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen11g005110 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen12g029870 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
CC GO:0009349 riboflavin synthase complex IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 157 200
No external refs found!